RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 PDK3Q15120 406 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 IMPG1Q17R60 797 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 FAM214AQ32MH5 1076 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 CCSMST1Q4G0I0 132 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 GGTA1PQ4G0N0 100 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 ZNF658BQ4V348 819 aaPredicted RBP6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 UGT2A3Q6UWM9 527 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 IFNEQ86WN2 208 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 RPS19BP1Q86WX3 136 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 KLHDC8AQ8IYD2 350 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 ADGRG5Q8IZF4 528 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 RNF175Q8N4F7 328 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 KRTCAP2Q8N6L1 136 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 ANKFN1Q8N957 763 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 LMNTD1Q8N9Z9 388 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 SEMA6DQ8NFY4 1073 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 M1APQ8TC57 530 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 ASZ1Q8WWH4 475 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 SELENOMQ8WWX9 145 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 HIST1H2AHQ96KK5 128 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 ZBTB18Q99592 522 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 CGREF1Q99674 301 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 HIST1H2AJQ99878 128 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 KCTD14Q9BQ13 255 aaPredicted RBP6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 H2AFJQ9BTM1 129 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 ACPTQ9BZG2 426 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 DPY30Q9C005 99 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 OR52A5Q9H2C5 316 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 VCXQ9H320 206 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 PIF1Q9H611 641 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 YY1AP1Q9H869 796 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 ACTR8Q9H981 624 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 SH2D2AQ9NP31 389 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 ARMC1Q9NVT9 282 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 C1orf109Q9NX04 203 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 GALNT8Q9NY28 637 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 ASIC5Q9NY37 505 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 UBAP1Q9NZ09 502 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 ACTR3BQ9P1U1 418 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 SCOCQ9UIL1 159 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 ACAD8Q9UKU7 415 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 CNOT11Q9UKZ1 510 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 PCDHGB4Q9UN71 923 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 SLC22A14Q9Y267 594 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 PCDHGB5Q9Y5G0 923 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 SNX13Q9Y5W8 968 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 EML6Q6ZMW3 1958 aa6.66□□□□□ -1.34
CTNNA1-227ENST00000521387 IGHV4-30-2A0A087WSY4 118 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 LOC105369274A0A096LPK9 316 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 C15orf38-AP3S2A0A0A6YYH1 394 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 LOC102723532A0A0G2JNH3 316 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 FEZF1A0PJY2 475 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 SERTM1A2A2V5 107 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 CTSVO60911 334 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 NDUFS7O75251 213 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 NPPAP01160 153 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 GSTM1P09488 218 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 IGHV4-31P0DP07 118 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 ZNF16P17020 682 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 CD22P20273 847 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 IL10P22301 178 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 PRPH2P23942 346 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 PDHA2P29803 388 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 PRLHRP49683 370 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 HNMTP50135 292 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 AP1S2P56377 157 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 CLDN8P56748 225 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 MLF1P58340 268 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 GSTM4Q03013 218 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 MAD2L1Q13257 205 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 PTGR1Q14914 329 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 FXNQ16595 210 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 RUNDC3AQ59EK9 446 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 MTX3Q5HYI7 312 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 TCTE1Q5JU00 501 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 SPANXN4Q5MJ08 99 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 FRMPD2BQ6IN97 320 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 PLXDC2Q6UX71 529 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 C22orf34Q6ZV56 151 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 ARPINQ7Z6K5 226 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 THOC6Q86W42 341 aaKnown RBP6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 MSRB3Q8IXL7 192 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 CFAP206Q8IYR0 622 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 OR4N4Q8N0Y3 316 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 SLC5A8Q8N695 610 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 TTC29Q8NA56 475 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 CLHC1Q8NHS4 586 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 GTF2H4Q92759 462 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 CMTM7Q96FZ5 175 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 APIPQ96GX9 242 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 ZNF583Q96ND8 569 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 WFIKKN1Q96NZ8 548 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 OR4K3Q96R72 315 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 TNFRSF13CQ96RJ3 184 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 MYCBPQ99417 103 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 PKP4Q99569 1192 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 TRIM15Q9C019 465 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 VN1R1Q9GZP7 353 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 MUC13Q9H3R2 512 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms