RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 CCDC153Q494R4 210 aa17.73■□□□□ 0.43
PABPC1-215ENST00000520804 CFAP157Q5JU67 520 aa17.73■□□□□ 0.43
PABPC1-215ENST00000520804 DUSP19Q8WTR2 217 aa17.73■□□□□ 0.43
PABPC1-215ENST00000520804 METTL2AQ96IZ6 378 aaKnown RBP17.73■□□□□ 0.43
PABPC1-215ENST00000520804 PTGES2Q9H7Z7 377 aa17.73■□□□□ 0.43
PABPC1-215ENST00000520804 ZNF337Q9Y3M9 751 aa17.73■□□□□ 0.43
PABPC1-215ENST00000520804 TESMINQ9Y4I5 508 aa17.73■□□□□ 0.43
PABPC1-215ENST00000520804 VPS13CQ709C8 3753 aa17.73■□□□□ 0.43
PABPC1-215ENST00000520804 OR2M5A3KFT3 312 aa17.72■□□□□ 0.43
PABPC1-215ENST00000520804 PLIN3O60664 434 aa17.72■□□□□ 0.43
PABPC1-215ENST00000520804 TNFRSF21O75509 655 aa17.72■□□□□ 0.43
PABPC1-215ENST00000520804 SMNDC1O75940 238 aaKnown RBP eCLIP17.72■□□□□ 0.43
PABPC1-215ENST00000520804 UROSP10746 265 aa17.72■□□□□ 0.43
PABPC1-215ENST00000520804 FOSL1P15407 271 aa17.72■□□□□ 0.43
PABPC1-215ENST00000520804 PRPH2P23942 346 aa17.72■□□□□ 0.43
PABPC1-215ENST00000520804 CCT5P48643 541 aa17.72■□□□□ 0.43
PABPC1-215ENST00000520804 SUCLG1P53597 346 aaKnown RBP17.72■□□□□ 0.43
PABPC1-215ENST00000520804 PSMD4P55036 377 aaKnown RBP17.72■□□□□ 0.43
PABPC1-215ENST00000520804 FAM27E3Q08E93 113 aa17.72■□□□□ 0.43
PABPC1-215ENST00000520804 VWA1Q6PCB0 445 aa17.72■□□□□ 0.43
PABPC1-215ENST00000520804 MARCH3Q86UD3 253 aa17.72■□□□□ 0.43
PABPC1-215ENST00000520804 CNEP1R1Q8N9A8 125 aa17.72■□□□□ 0.43
PABPC1-215ENST00000520804 OR5M1Q8NGP8 315 aa17.72■□□□□ 0.43
PABPC1-215ENST00000520804 FIG4Q92562 907 aa17.72■□□□□ 0.43
PABPC1-215ENST00000520804 C1GALT1C1Q96EU7 318 aa17.72■□□□□ 0.43
PABPC1-215ENST00000520804 EGLN2Q96KS0 407 aa17.72■□□□□ 0.43
PABPC1-215ENST00000520804 C3orf14Q9HBI5 128 aa17.72■□□□□ 0.43
PABPC1-215ENST00000520804 OXSMQ9NWU1 459 aa17.72■□□□□ 0.43
PABPC1-215ENST00000520804 TTC36A6NLP5 189 aa17.71■□□□□ 0.43
PABPC1-215ENST00000520804 NPIPB8E9PQR5 432 aa17.71■□□□□ 0.43
PABPC1-215ENST00000520804 H0YC42 278 aa17.71■□□□□ 0.43
PABPC1-215ENST00000520804 SEC22BO75396 215 aa17.71■□□□□ 0.43
PABPC1-215ENST00000520804 CD53P19397 219 aa17.71■□□□□ 0.43
PABPC1-215ENST00000520804 GABRA3P34903 492 aa17.71■□□□□ 0.43
PABPC1-215ENST00000520804 CRHR1P34998 444 aa17.71■□□□□ 0.43
PABPC1-215ENST00000520804 KIR2DL2P43627 348 aaPredicted RBP17.71■□□□□ 0.43
PABPC1-215ENST00000520804 RFX3P48380 749 aa17.71■□□□□ 0.43
PABPC1-215ENST00000520804 TPD52P55327 224 aaPredicted RBP17.71■□□□□ 0.43
PABPC1-215ENST00000520804 GLYR1Q49A26 553 aaPredicted RBP17.71■□□□□ 0.43
PABPC1-215ENST00000520804 ZNF551Q7Z340 670 aaPredicted RBP17.71■□□□□ 0.43
PABPC1-215ENST00000520804 BTLAQ7Z6A9 289 aa17.71■□□□□ 0.43
PABPC1-215ENST00000520804 GSPT2Q8IYD1 628 aaKnown RBP17.71■□□□□ 0.43
PABPC1-215ENST00000520804 PGM2Q96G03 612 aa17.71■□□□□ 0.43
PABPC1-215ENST00000520804 PIGQQ9BRB3 760 aa17.71■□□□□ 0.43
PABPC1-215ENST00000520804 RNF122Q9H9V4 155 aa17.71■□□□□ 0.43
PABPC1-215ENST00000520804 EIF3LQ9Y262 564 aaKnown RBP17.71■□□□□ 0.43
PABPC1-215ENST00000520804 MAP1AP78559 2803 aaPredicted RBP17.71■□□□□ 0.42
PABPC1-215ENST00000520804 IGLV3-32A0A0A0MS00 114 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 H3BML4 177 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 SLC28A1O00337 649 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 SEC14L5O43304 696 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 KCNH1O95259 989 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 UTS2O95399 124 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 SHBGP04278 402 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 CPA3P15088 417 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 HOXB4P17483 251 aaPredicted RBP17.7■□□□□ 0.42
PABPC1-215ENST00000520804 HOXC12P31275 282 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 CD79BP40259 229 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 CLDN20P56880 219 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 PRR5P85299 388 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 C17orf67Q0P5P2 114 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 HSPB3Q12988 150 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 CLEC6AQ6EIG7 209 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 ZNF474Q6S9Z5 364 aaPredicted RBP17.7■□□□□ 0.42
PABPC1-215ENST00000520804 APOOLQ6UXV4 268 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 CCDC63Q8NA47 563 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 WFDC11Q8NEX6 87 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 HOXB13Q92826 284 aaPredicted RBP17.7■□□□□ 0.42
PABPC1-215ENST00000520804 ZNF764Q96H86 408 aaPredicted RBP17.7■□□□□ 0.42
PABPC1-215ENST00000520804 WFIKKN1Q96NZ8 548 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 PINK1Q9BXM7 581 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 TBL1XR1Q9BZK7 514 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 C12orf65Q9H3J6 166 aaKnown RBP17.7■□□□□ 0.42
PABPC1-215ENST00000520804 GSX1Q9H4S2 264 aaPredicted RBP17.7■□□□□ 0.42
PABPC1-215ENST00000520804 NEUROD4Q9HD90 331 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 BEX4Q9NWD9 120 aaPredicted RBP17.7■□□□□ 0.42
PABPC1-215ENST00000520804 C1orf109Q9NX04 203 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 ZNF175Q9Y473 711 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 PTGDR2Q9Y5Y4 395 aa17.7■□□□□ 0.42
PABPC1-215ENST00000520804 PCNX3Q9H6A9 2034 aa17.69■□□□□ 0.42
PABPC1-215ENST00000520804 GXYLT2A0PJZ3 443 aa17.69■□□□□ 0.42
PABPC1-215ENST00000520804 EMC8O43402 210 aa17.69■□□□□ 0.42
PABPC1-215ENST00000520804 ANGPTL1O95841 491 aa17.69■□□□□ 0.42
PABPC1-215ENST00000520804 IGKV1D-16P01601 117 aa17.69■□□□□ 0.42
PABPC1-215ENST00000520804 PRPS2P11908 318 aa17.69■□□□□ 0.42
PABPC1-215ENST00000520804 MAP3K8P41279 467 aa17.69■□□□□ 0.42
PABPC1-215ENST00000520804 SIRPAP78324 504 aa17.69■□□□□ 0.42
PABPC1-215ENST00000520804 OCRLQ01968 901 aa17.69■□□□□ 0.42
PABPC1-215ENST00000520804 TMEM44Q2T9K0 475 aa17.69■□□□□ 0.42
PABPC1-215ENST00000520804 LIPMQ5VYY2 423 aa17.69■□□□□ 0.42
PABPC1-215ENST00000520804 ANKRD26P1Q6NSI1 321 aa17.69■□□□□ 0.42
PABPC1-215ENST00000520804 TDRPQ86YL5 185 aa17.69■□□□□ 0.42
PABPC1-215ENST00000520804 FNDC9Q8TBE3 224 aa17.69■□□□□ 0.42
PABPC1-215ENST00000520804 PIK3R3Q92569 461 aa17.69■□□□□ 0.42
PABPC1-215ENST00000520804 GFM2Q969S9 779 aaKnown RBP17.69■□□□□ 0.42
PABPC1-215ENST00000520804 ZNF845Q96IR2 970 aaPredicted RBP17.69■□□□□ 0.42
PABPC1-215ENST00000520804 FCRL1Q96LA6 429 aa17.69■□□□□ 0.42
PABPC1-215ENST00000520804 FAM111AQ96PZ2 611 aa17.69■□□□□ 0.42
PABPC1-215ENST00000520804 OPN3Q9H1Y3 402 aaPredicted RBP17.69■□□□□ 0.42
PABPC1-215ENST00000520804 LRTM1Q9HBL6 345 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms