RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 IKBIPQ70UQ0 350 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 TRIM46Q7Z4K8 759 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 MARCH3Q86UD3 253 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 CNPY4Q8N129 248 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 CEP112Q8N8E3 955 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 OR5M1Q8NGP8 315 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 FIG4Q92562 907 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 ELP4Q96EB1 424 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 FAM111AQ96PZ2 611 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 RHOXF2Q9BQY4 288 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 PINK1Q9BXM7 581 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 TXLNGYQ9BZA5 131 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 RTN4RQ9BZR6 473 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 PTGES2Q9H7Z7 377 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 RRAGDQ9NQL2 400 aaPredicted RBP13.69□□□□□ -0.22
CSMD1-207ENST00000520451 MRTO4Q9UKD2 239 aaKnown RBP13.69□□□□□ -0.22
CSMD1-207ENST00000520451 WBP11Q9Y2W2 641 aaKnown RBP13.69□□□□□ -0.22
CSMD1-207ENST00000520451 ZNF337Q9Y3M9 751 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 OR2M5A3KFT3 312 aa13.68□□□□□ -0.22
CSMD1-207ENST00000520451 H3BML4 177 aa13.68□□□□□ -0.22
CSMD1-207ENST00000520451 UTS2O95399 124 aa13.68□□□□□ -0.22
CSMD1-207ENST00000520451 HOXB4P17483 251 aaPredicted RBP13.68□□□□□ -0.22
CSMD1-207ENST00000520451 CD79BP40259 229 aa13.68□□□□□ -0.22
CSMD1-207ENST00000520451 KIR2DL2P43627 348 aaPredicted RBP13.68□□□□□ -0.22
CSMD1-207ENST00000520451 SUCLG1P53597 346 aaKnown RBP13.68□□□□□ -0.22
CSMD1-207ENST00000520451 PSMD4P55036 377 aaKnown RBP13.68□□□□□ -0.22
CSMD1-207ENST00000520451 BTLAQ7Z6A9 289 aa13.68□□□□□ -0.22
CSMD1-207ENST00000520451 GSPT2Q8IYD1 628 aaKnown RBP13.68□□□□□ -0.22
CSMD1-207ENST00000520451 DUSP19Q8WTR2 217 aa13.68□□□□□ -0.22
CSMD1-207ENST00000520451 C1GALT1C1Q96EU7 318 aa13.68□□□□□ -0.22
CSMD1-207ENST00000520451 PGM2Q96G03 612 aa13.68□□□□□ -0.22
CSMD1-207ENST00000520451 PIGQQ9BRB3 760 aa13.68□□□□□ -0.22
CSMD1-207ENST00000520451 LMF2Q9BU23 707 aaKnown RBP13.68□□□□□ -0.22
CSMD1-207ENST00000520451 TBL1XR1Q9BZK7 514 aa13.68□□□□□ -0.22
CSMD1-207ENST00000520451 OPN3Q9H1Y3 402 aaPredicted RBP13.68□□□□□ -0.22
CSMD1-207ENST00000520451 TNFRSF12AQ9NP84 129 aa13.68□□□□□ -0.22
CSMD1-207ENST00000520451 EQTNQ9NQ60 294 aa13.68□□□□□ -0.22
CSMD1-207ENST00000520451 BEX4Q9NWD9 120 aaPredicted RBP13.68□□□□□ -0.22
CSMD1-207ENST00000520451 KLHL28Q9NXS3 571 aa13.68□□□□□ -0.22
CSMD1-207ENST00000520451 C6orf203Q9P0P8 240 aaPredicted RBP13.68□□□□□ -0.22
CSMD1-207ENST00000520451 GXYLT2A0PJZ3 443 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 LINC01387J3KSC0 135 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 KIF2AO00139 706 aaPredicted RBP13.67□□□□□ -0.22
CSMD1-207ENST00000520451 GMFGO60234 142 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 PLIN3O60664 434 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 SEC22BO75396 215 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 TNFRSF21O75509 655 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 KCNH1O95259 989 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 UROSP10746 265 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 HOXC12P31275 282 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 GABRA3P34903 492 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 CLDN20P56880 219 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 DNAJB13P59910 316 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 HSPB3Q12988 150 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 CCDC153Q494R4 210 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 CLEC6AQ6EIG7 209 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 ZNF474Q6S9Z5 364 aaPredicted RBP13.67□□□□□ -0.22
CSMD1-207ENST00000520451 ZNF551Q7Z340 670 aaPredicted RBP13.67□□□□□ -0.22
CSMD1-207ENST00000520451 CCDC63Q8NA47 563 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 KIF18AQ8NI77 898 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 FNDC9Q8TBE3 224 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 GFM2Q969S9 779 aaKnown RBP13.67□□□□□ -0.22
CSMD1-207ENST00000520451 ZNF845Q96IR2 970 aaPredicted RBP13.67□□□□□ -0.22
CSMD1-207ENST00000520451 EGLN2Q96KS0 407 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 WFIKKN1Q96NZ8 548 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 MED18Q9BUE0 208 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 C3orf14Q9HBI5 128 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 ZNF175Q9Y473 711 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 NAV3Q8IVL0 2385 aa13.67□□□□□ -0.22
CSMD1-207ENST00000520451 TTC36A6NLP5 189 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 SHISA8B8ZZ34 492 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 PDPK1O15530 556 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 CTIFO43310 598 aaKnown RBP13.66□□□□□ -0.22
CSMD1-207ENST00000520451 EMC8O43402 210 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 ANGPTL1O95841 491 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 IGKV1D-16P01601 117 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 IFI6P09912 130 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 POU2F1P14859 743 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 CCKARP32238 428 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 GPC1P35052 558 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 KCNJ5P48544 419 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 CCT5P48643 541 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 PCYT1AP49585 367 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 RPS3AP61247 264 aaKnown RBP13.66□□□□□ -0.22
CSMD1-207ENST00000520451 PON3Q15166 354 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 GRAMD1BQ3KR37 738 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 GLYR1Q49A26 553 aaPredicted RBP13.66□□□□□ -0.22
CSMD1-207ENST00000520451 ANKRD26P1Q6NSI1 321 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 SH2D5Q6ZV89 423 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 GPR151Q8TDV0 419 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 PIK3R3Q92569 461 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 CIDECQ96AQ7 238 aaPredicted RBP13.66□□□□□ -0.22
CSMD1-207ENST00000520451 SLC39A3Q9BRY0 314 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 C12orf65Q9H3J6 166 aaKnown RBP13.66□□□□□ -0.22
CSMD1-207ENST00000520451 RNF122Q9H9V4 155 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 LRTM1Q9HBL6 345 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 OXSMQ9NWU1 459 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 ZNF226Q9NYT6 803 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 CCL27Q9Y4X3 112 aa13.66□□□□□ -0.22
CSMD1-207ENST00000520451 PTGDR2Q9Y5Y4 395 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms