RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 CPXM1Q96SM3 734 aa6.2□□□□□ -1.42
LSM1-202ENST00000520286 ALG9Q9H6U8 611 aa6.2□□□□□ -1.42
LSM1-202ENST00000520286 ZNF696Q9H7X3 374 aa6.2□□□□□ -1.42
LSM1-202ENST00000520286 TRPV5Q9NQA5 729 aa6.2□□□□□ -1.42
LSM1-202ENST00000520286 RDH8Q9NYR8 311 aa6.2□□□□□ -1.42
LSM1-202ENST00000520286 ZNF580Q9UK33 172 aa6.2□□□□□ -1.42
LSM1-202ENST00000520286 NIP7Q9Y221 180 aaKnown RBP eCLIP6.2□□□□□ -1.42
LSM1-202ENST00000520286 SLC9A8Q9Y2E8 581 aa6.2□□□□□ -1.42
LSM1-202ENST00000520286 TTC41PQ6P2S7 1318 aa6.2□□□□□ -1.42
LSM1-202ENST00000520286 USP54Q70EL1 1684 aa6.2□□□□□ -1.42
LSM1-202ENST00000520286 C4BP0C0L5 1744 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 MPTX1A8MV57 137 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 GPR89AB7ZAQ6 455 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 NR5A2O00482 541 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 TRAFD1O14545 582 aaPredicted RBP6.19□□□□□ -1.42
LSM1-202ENST00000520286 ZNF749O43361 778 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 ZFAND5O76080 213 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 PRAMEF12O95522 483 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 SP1P08047 785 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 GPR89BP0CG08 455 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 ADORA3P0DMS8 318 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 DRD5P21918 477 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 HTR2AP28223 471 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 DLSTP36957 453 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 NOP14P78316 857 aaKnown RBP6.19□□□□□ -1.42
LSM1-202ENST00000520286 FASTKQ14296 549 aaKnown RBP6.19□□□□□ -1.42
LSM1-202ENST00000520286 EMC2Q15006 297 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 ANKRD55Q3KP44 614 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 ZFP69Q49AA0 526 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 UNC50Q53HI1 259 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 HSP90AB3PQ58FF7 597 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 ZNF311Q5JNZ3 666 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 NCR3LG1Q68D85 454 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 SLC39A4Q6P5W5 647 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 RGS9BPQ6ZS82 235 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 LPCAT2Q7L5N7 544 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 LHFPL4Q7Z7J7 247 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 LUZP1Q86V48 1076 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 CBWD2Q8IUF1 395 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 CENPSQ8N2Z9 138 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 VSTM2LQ96N03 204 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 RCHY1Q96PM5 261 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 APOOQ9BUR5 198 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 API5Q9BZZ5 524 aaKnown RBP6.19□□□□□ -1.42
LSM1-202ENST00000520286 TMEM117Q9H0C3 514 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 NT5C3AQ9H0P0 336 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 CLSTN2Q9H4D0 955 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 NT5DC2Q9H857 520 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 RMND5AQ9H871 391 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 Q9HAA7 133 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 DDX19AQ9NUU7 478 aaKnown RBP6.19□□□□□ -1.42
LSM1-202ENST00000520286 GPR83Q9NYM4 423 aa6.19□□□□□ -1.42
LSM1-202ENST00000520286 EDC4Q6P2E9 1401 aaKnown RBP6.18□□□□□ -1.42
LSM1-202ENST00000520286 A0A0A6YYD4 124 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 TRBV5-4A0A0C4DH59 114 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 IGLON5A6NGN9 336 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 WASH3PC4AMC7 463 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 H0YL77 283 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 SDHDO14521 159 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 EI24O14681 340 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 MCF2LO15068 1137 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 DUS4LO95620 317 aaKnown RBP6.18□□□□□ -1.42
LSM1-202ENST00000520286 GOT2P00505 430 aaKnown RBP6.18□□□□□ -1.42
LSM1-202ENST00000520286 SLC35G4P0C7Q5 338 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 ZSCAN5DPP0CG00 497 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 SYT1P21579 422 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 RFC2P35250 354 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 RUSC1-AS1Q66K80 236 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 ASPHD2Q6ICH7 369 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 CBLN3Q6UW01 205 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 WASH2PQ6VEQ5 465 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 EFCAB13Q8IY85 973 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 METTL4Q8N3J2 472 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 ZNF606Q8WXB4 792 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 C4orf36Q96KX1 117 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 NDE1Q9NXR1 346 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 CHRNA9Q9UGM1 479 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.18□□□□□ -1.42
LSM1-202ENST00000520286 RNF115Q9Y4L5 304 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 KIAA1551Q9HCM1 1747 aa6.18□□□□□ -1.42
LSM1-202ENST00000520286 USP42Q9H9J4 1324 aaKnown RBP6.18□□□□□ -1.42
LSM1-202ENST00000520286 TOGARAM1Q9Y4F4 1720 aa6.17□□□□□ -1.42
LSM1-202ENST00000520286 A0A0J9YVX5 310 aa6.17□□□□□ -1.42
LSM1-202ENST00000520286 TTC26A0AVF1 554 aa6.17□□□□□ -1.42
LSM1-202ENST00000520286 H3BQF6 201 aa6.17□□□□□ -1.42
LSM1-202ENST00000520286 CYB561D2O14569 222 aa6.17□□□□□ -1.42
LSM1-202ENST00000520286 TFECO14948 347 aaPredicted RBP6.17□□□□□ -1.42
LSM1-202ENST00000520286 POLR3GO15318 223 aaPredicted RBP6.17□□□□□ -1.42
LSM1-202ENST00000520286 ECDO95905 644 aaPredicted RBP6.17□□□□□ -1.42
LSM1-202ENST00000520286 ZNF853P0CG23 659 aa6.17□□□□□ -1.42
LSM1-202ENST00000520286 GSTT2P0CG29 244 aa6.17□□□□□ -1.42
LSM1-202ENST00000520286 GSTT2BP0CG30 244 aa6.17□□□□□ -1.42
LSM1-202ENST00000520286 HTR5AP47898 357 aa6.17□□□□□ -1.42
LSM1-202ENST00000520286 MRPS6P82932 125 aaKnown RBP6.17□□□□□ -1.42
LSM1-202ENST00000520286 TMEM30BQ3MIR4 351 aa6.17□□□□□ -1.42
LSM1-202ENST00000520286 DCAF4L1Q3SXM0 396 aa6.17□□□□□ -1.42
LSM1-202ENST00000520286 POM121L1PQ3SYA9 428 aa6.17□□□□□ -1.42
LSM1-202ENST00000520286 ATAD3BQ5T9A4 648 aa6.17□□□□□ -1.42
LSM1-202ENST00000520286 DMKNQ6E0U4 476 aaPredicted RBP6.17□□□□□ -1.42
LSM1-202ENST00000520286 ZNF562Q6V9R5 426 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms