RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 MT-ND2P03891 347 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 ABHD2P08910 425 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 H2AFZP0C0S5 128 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 THRAP10827 490 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 EEF2P13639 858 aaKnown RBP2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 GOT1P17174 413 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 POLR2EP19388 210 aaKnown RBP2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 C4BPBP20851 252 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 EDNRAP25101 427 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 CTNNA2P26232 953 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 CCND3P30281 292 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 OR3A1P47881 315 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 IFNAR2P48551 515 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 HNRNPFP52597 415 aaKnown RBP2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 POLR2FP61218 127 aaKnown RBP2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 ATP6V0D1P61421 351 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 ERVK-16P61578 105 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 CDK16Q00536 496 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 MYBPC1Q00872 1141 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 FOLH1Q04609 750 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 CD300CQ08708 224 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 ASPHQ12797 758 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 PPP2R5CQ13362 524 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 LY6DQ14210 128 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 OXA1LQ15070 435 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 PDK3Q15120 406 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 KCNJ8Q15842 424 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 MEP1BQ16820 701 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 EXOC3L4Q17RC7 722 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 QRICH1Q2TAL8 776 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 TRMT5Q32P41 509 aaKnown RBP2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZNF829Q3KNS6 432 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 ARMCX4Q5H9R4 360 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 TCEAL6Q6IPX3 200 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZNF770Q6IQ21 691 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 NIPAL1Q6NVV3 410 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 RWDD4Q6NW29 188 aaKnown RBP2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 ALKBH5Q6P6C2 394 aaKnown RBP2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 LRRC8BQ6P9F7 803 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 IZUMO2Q6UXV1 221 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 TMEM179Q6ZVK1 233 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 RAPH1Q70E73 1250 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 H2AFVQ71UI9 128 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 NLRP9Q7RTR0 991 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 OTOAQ7RTW8 1153 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 ARPINQ7Z6K5 226 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 DHDDSQ86SQ9 333 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 VPS36Q86VN1 386 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 GPBP1Q86WP2 473 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 TMEM126BQ8IUX1 230 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 CERS5Q8N5B7 392 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 TEX26Q8N6G2 289 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 TMEM99Q8N816 258 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 SPERTQ8NA61 448 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 OR7G3Q8NG95 312 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 TMA16Q96EY4 203 aaKnown RBP2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 C18orf12Q96KH6 178 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 RUNDC3BQ96NL0 473 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 TGS1Q96RS0 853 aaKnown RBP2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 RIT2Q99578 217 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 PKP2Q99959 881 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 SH3GL1Q99961 368 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 C17orf62Q9BQA9 187 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 C5orf66Q9H5L9 145 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 TMEM206Q9H813 350 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 COPS7BQ9H9Q2 264 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 GPR173Q9NS66 373 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 NUDT4Q9NZJ9 180 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 DNAJB9Q9UBS3 223 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLC7A8Q9UHI5 535 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 GMEB2Q9UKD1 530 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 POMT2Q9UKY4 750 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 PACSIN2Q9UNF0 486 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 DOT1LQ8TEK3 1739 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 COL2A1P02458 1487 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 TNRC6CQ9HCJ0 1690 aaKnown RBP2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 ARFGEF1Q9Y6D6 1849 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 FER1L6Q2WGJ9 1857 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 FAM47DPA6NHR8 397 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 MIF4GDA9UHW6 222 aaKnown RBP2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 TMEM114B3SHH9 223 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 TCP10L2B9ZVM9 353 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 ANKRD63C9JTQ0 380 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 PI4K2BG5E9Z4 385 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 H0YJX3 145 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 H3BSA7 217 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 NDC80O14777 642 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 CLOCKO15516 846 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 NXPH4O95158 308 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 TGDSO95455 350 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 TTC4O95801 387 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 GAS8O95995 478 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 SUPT20HL2P0C7V6 817 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 DLATP10515 647 aaKnown RBP2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 GIFP27352 417 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 ADSSP30520 456 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 GPR183P32249 361 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 FDFT1P37268 417 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 FRKP42685 505 aaPredicted RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms