RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 FRRS1Q6ZNA5 592 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 OLIG3Q7RTU3 272 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 ZAR1Q86SH2 424 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 GALNT10Q86SR1 603 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 BBS10Q8TAM1 723 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 TTC9Q92623 222 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 HAS2Q92819 552 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 CRELD1Q96HD1 420 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 CADM1Q9BY67 442 aaKnown RBP16.37■□□□□ 0.21
SDC2-205ENST00000520233 HOXD1Q9GZZ0 328 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 RUBCNLQ9H714 662 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 PCDHGB7Q9Y5F8 929 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 PCDHGA10Q9Y5H3 936 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 CEP295Q9C0D2 2601 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 FREM2Q5SZK8 3169 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 OR5H15A6NDH6 313 aa16.36■□□□□ 0.21
SDC2-205ENST00000520233 TP53I11O14683 189 aa16.36■□□□□ 0.21
SDC2-205ENST00000520233 KIAA0513O60268 411 aa16.36■□□□□ 0.21
SDC2-205ENST00000520233 UTS2O95399 124 aa16.36■□□□□ 0.21
SDC2-205ENST00000520233 PGM1P36871 562 aa16.36■□□□□ 0.21
SDC2-205ENST00000520233 ST13P50502 369 aaKnown RBP16.36■□□□□ 0.21
SDC2-205ENST00000520233 OC90Q02509 493 aaPredicted RBP16.36■□□□□ 0.21
SDC2-205ENST00000520233 CHRNEQ04844 493 aa16.36■□□□□ 0.21
SDC2-205ENST00000520233 FLYWCH1Q4VC44 716 aa16.36■□□□□ 0.21
SDC2-205ENST00000520233 RPS26P11Q5JNZ5 115 aaPredicted RBP16.36■□□□□ 0.21
SDC2-205ENST00000520233 INTS11Q5TA45 600 aaKnown RBP16.36■□□□□ 0.21
SDC2-205ENST00000520233 RTL4Q6ZR62 310 aa16.36■□□□□ 0.21
SDC2-205ENST00000520233 CYP4Z2PQ8N1L4 340 aa16.36■□□□□ 0.21
SDC2-205ENST00000520233 ZNF619Q8N2I2 560 aa16.36■□□□□ 0.21
SDC2-205ENST00000520233 GOLM1Q8NBJ4 401 aa16.36■□□□□ 0.21
SDC2-205ENST00000520233 FAM13CQ8NE31 585 aa16.36■□□□□ 0.21
SDC2-205ENST00000520233 MCUR1Q96AQ8 359 aa16.36■□□□□ 0.21
SDC2-205ENST00000520233 TMCO6Q96DC7 493 aa16.36■□□□□ 0.21
SDC2-205ENST00000520233 SGCZQ96LD1 299 aa16.36■□□□□ 0.21
SDC2-205ENST00000520233 SECISBP2Q96T21 854 aaKnown RBP16.36■□□□□ 0.21
SDC2-205ENST00000520233 TREX2Q9BQ50 279 aaPredicted RBP16.36■□□□□ 0.21
SDC2-205ENST00000520233 MMADHCQ9H3L0 296 aaPredicted RBP16.36■□□□□ 0.21
SDC2-205ENST00000520233 MTHFD2LQ9H903 347 aaPredicted RBP16.36■□□□□ 0.21
SDC2-205ENST00000520233 ANKRD10Q9NXR5 420 aa16.36■□□□□ 0.21
SDC2-205ENST00000520233 MKLN1Q9UL63 735 aa16.36■□□□□ 0.21
SDC2-205ENST00000520233 DSPPQ9NZW4 1301 aa16.36■□□□□ 0.21
SDC2-205ENST00000520233 MED13Q9UHV7 2174 aa16.36■□□□□ 0.21
SDC2-205ENST00000520233 ETS2P15036 469 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 TCN1P20061 433 aaPredicted RBP16.35■□□□□ 0.21
SDC2-205ENST00000520233 ME2P23368 584 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 ATP12AP54707 1039 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 PCBP3P57721 371 aaKnown RBP16.35■□□□□ 0.21
SDC2-205ENST00000520233 RPP38P78345 283 aaKnown RBP16.35■□□□□ 0.21
SDC2-205ENST00000520233 GPR68Q15743 365 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 ZNF141Q15928 474 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 FXNQ16595 210 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 LINC00303Q3SY05 128 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 DESI1Q6ICB0 168 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 PGM2L1Q6PCE3 622 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 IGFL3Q6UXB1 125 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 CCDC80Q76M96 950 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 FBXW8Q8N3Y1 598 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 OR10G3Q8NGC4 313 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 OR5M3Q8NGP4 307 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 OR4C3Q8NH37 302 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 SPPL2AQ8TCT8 520 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 PAQR8Q8TEZ7 354 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 OIT3Q8WWZ8 545 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 TM9SF4Q92544 642 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 SH2D2AQ9NP31 389 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 UBQLN4Q9NRR5 601 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 PLA2G3Q9NZ20 509 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 LRFN1Q9P244 771 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 SUCOQ9UBS9 1254 aaKnown RBP16.35■□□□□ 0.21
SDC2-205ENST00000520233 CHCHD2Q9Y6H1 151 aaPredicted RBP16.35■□□□□ 0.21
SDC2-205ENST00000520233 DOCK10Q96BY6 2186 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 CPAMD8Q8IZJ3 1885 aa16.35■□□□□ 0.21
SDC2-205ENST00000520233 NPIPB9F8W1W9 429 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 GSTA4O15217 222 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 RRP9O43818 475 aaKnown RBP16.34■□□□□ 0.21
SDC2-205ENST00000520233 ICOSLGO75144 302 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 GCM2O75603 506 aaPredicted RBP16.34■□□□□ 0.21
SDC2-205ENST00000520233 PDE5AO76074 875 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 NGFRP08138 427 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 GGT1P19440 569 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 TBXA2RP21731 343 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 DCTP40126 519 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 ARG2P78540 354 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 BNIP2Q12982 314 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 GRAMD1BQ3KR37 738 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 TMEM81Q6P7N7 255 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 C19orf48Q6RUI8 117 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 PATL1Q86TB9 770 aaKnown RBP16.34■□□□□ 0.21
SDC2-205ENST00000520233 ZNF227Q86WZ6 799 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 KRT73Q86Y46 540 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 PTRH1Q86Y79 214 aaKnown RBP16.34■□□□□ 0.21
SDC2-205ENST00000520233 HPS6Q86YV9 775 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 FAM156AQ8NDB6 213 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 RNF138Q8WVD3 245 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 CLPTM1LQ96KA5 538 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 NODALQ96S42 347 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 ZNF607Q96SK3 696 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 FLRT3Q9NZU0 649 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 CNIH4Q9P003 139 aa16.34■□□□□ 0.21
SDC2-205ENST00000520233 GPC6Q9Y625 555 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms