RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 SGCDQ92629 289 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 SLC22A18Q96BI1 424 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 OR2A14Q96R47 310 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 GPR21Q99679 349 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 PITPNM3Q9BZ71 974 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 RANGRFQ9HD47 186 aaPredicted RBP6.45□□□□□ -1.38
SDCBP-208ENST00000520228 APMAPQ9HDC9 416 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 PDE7BQ9NP56 450 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 FAM114A2Q9NRY5 505 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 FGF21Q9NSA1 209 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 SOHLH2Q9NX45 425 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 SPHK1Q9NYA1 384 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 TAS2R13Q9NYV9 303 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 CIDEBQ9UHD4 219 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 LNPEPQ9UIQ6 1025 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 TRMT6Q9UJA5 497 aaKnown RBP6.45□□□□□ -1.38
SDCBP-208ENST00000520228 RUVBL2Q9Y230 463 aaKnown RBP6.45□□□□□ -1.38
SDCBP-208ENST00000520228 NFS1Q9Y697 457 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 CHD6Q8TD26 2715 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 ACACAQ13085 2346 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 ZFYVE26Q68DK2 2539 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 KMT2BQ9UMN6 2715 aaPredicted RBP6.44□□□□□ -1.38
SDCBP-208ENST00000520228 hDV102S1A0JD36 115 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 A8MZ25 164 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 VCYO14598 125 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 RASGRF2O14827 1237 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 SPAG6O75602 509 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 STK17BO94768 372 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 CATP04040 527 aaKnown RBP6.44□□□□□ -1.38
SDCBP-208ENST00000520228 GSTA2P09210 222 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 FGF5P12034 268 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 PVRP15151 417 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 UGT2B7P16662 529 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 CD9P21926 228 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 MCM3P25205 808 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 PKLRP30613 574 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 MAGEA4P43358 317 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 BDKRB1P46663 353 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 RGS4P49798 205 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 CDKN2DP55273 166 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 ARF3P61204 181 aaPredicted RBP6.44□□□□□ -1.38
SDCBP-208ENST00000520228 TUBB4BP68371 445 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 ARF1P84077 181 aaKnown RBP6.44□□□□□ -1.38
SDCBP-208ENST00000520228 GRB7Q14451 532 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 CCSMST1Q4G0I0 132 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 PAPPA-AS1Q5QFB9 102 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 MZT2BQ6NZ67 158 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 GLDNQ6ZMI3 551 aaPredicted RBP6.44□□□□□ -1.38
SDCBP-208ENST00000520228 CYHR1Q6ZMK1 362 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 CYS1Q717R9 158 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 SLC26A11Q86WA9 606 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 CHERPQ8IWX8 916 aaKnown RBP6.44□□□□□ -1.38
SDCBP-208ENST00000520228 CPNE9Q8IYJ1 553 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 CEP112Q8N8E3 955 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 GPATCH11Q8N954 259 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 LMNTD1Q8N9Z9 388 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 LINC01555Q8NAE3 123 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 NOA1Q8NC60 698 aaKnown RBP6.44□□□□□ -1.38
SDCBP-208ENST00000520228 OR2L8Q8NGY9 312 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 OR14L1PQ8NHC6 308 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 CD200R1Q8TD46 325 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 EEF1AKMT1Q8WVE0 214 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 IFT81Q8WYA0 676 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 RND1Q92730 232 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 CDKL2Q92772 493 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 RRNAD1Q96FB5 475 aaKnown RBP6.44□□□□□ -1.38
SDCBP-208ENST00000520228 IL17FQ96PD4 163 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 CCNL2Q96S94 520 aaPredicted RBP6.44□□□□□ -1.38
SDCBP-208ENST00000520228 RAB11FIP5Q9BXF6 653 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 ULBP3Q9BZM4 244 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 NOX4Q9NPH5 578 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 NSMCE4AQ9NXX6 385 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 PILRAQ9UKJ1 303 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 RARRES3Q9UL19 164 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 BTRCQ9Y297 605 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 CACNA1BQ00975 2339 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 RP1P56715 2156 aa6.44□□□□□ -1.38
SDCBP-208ENST00000520228 A0A0J9YY10 115 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 TCRBV9S1A1TA0A576 114 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 KRT87PA6NCN2 255 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 ARHGEF33A8MVX0 844 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 GFYI3L273 518 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 SOCS6O14544 535 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 ZBTB14O43829 449 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 RAD1O60671 282 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 PSIP1O75475 530 aaKnown RBP6.43□□□□□ -1.38
SDCBP-208ENST00000520228 SLC25A12O75746 678 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 PIAS1O75925 651 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 KIAA0754O94854 1291 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 MPC1LP0DKB6 136 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 FCGR1AP12314 374 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 SAT1P21673 171 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 PEBP1P30086 187 aaKnown RBP6.43□□□□□ -1.38
SDCBP-208ENST00000520228 SSTR1P30872 391 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 HSD17B2P37059 387 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 PDLIM4P50479 330 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 BRWD1-AS2P59051 145 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 GPX6P59796 221 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 SEC61A1P61619 476 aaKnown RBP6.43□□□□□ -1.38
SDCBP-208ENST00000520228 ILF2Q12905 390 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms