RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 TMEM88Q6PEY1 159 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 SMIM15Q7Z3B0 74 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 GATSQ8NAP1 163 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 SLC39A13Q96H72 371 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 FCRL1Q96LA6 429 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 SMCO4Q9NRQ5 59 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 AGPAT4Q9NRZ5 378 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 MPDZO75970 2070 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 I6L893 689 aaPredicted RBP8.26□□□□□ -1.09
CSMD1-206ENST00000520002 IMPA2O14732 288 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 CD3GP09693 182 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 PPA1Q15181 289 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 NLGN2Q8NFZ4 835 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 OR56A3Q8NH54 315 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 BRF2Q9HAW0 419 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 FAM86C1Q9NVL1 165 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 KDM3BQ7LBC6 1761 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 GLAP06280 429 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 PPP3CBP16298 524 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 RPS5P46782 204 aaKnown RBP8.26□□□□□ -1.09
CSMD1-206ENST00000520002 IRF5Q13568 498 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 SELPLGQ14242 412 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 ITPRIPL2Q3MIP1 535 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 ZNF546Q86UE3 836 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 C10orf90Q96M02 699 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 GPN2Q9H9Y4 310 aaPredicted RBP8.26□□□□□ -1.09
CSMD1-206ENST00000520002 SLC6A5Q9Y345 797 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 F3P13726 295 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 PLEKHN1Q494U1 663 aaPredicted RBP8.26□□□□□ -1.09
CSMD1-206ENST00000520002 HIST2H3AQ71DI3 136 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 OR9A1PQ8NGU1 263 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 TSGA13Q96PP4 275 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 A0A087WZY1 265 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 SCAF4O95104 1147 aaKnown RBP8.26□□□□□ -1.09
CSMD1-206ENST00000520002 PFKLP17858 780 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 RAB3AP20336 220 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 TLE1Q04724 770 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 RBM39Q14498 530 aaKnown RBP8.26□□□□□ -1.09
CSMD1-206ENST00000520002 TEAD2Q15562 447 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 ARSJQ5FYB0 599 aaPredicted RBP8.26□□□□□ -1.09
CSMD1-206ENST00000520002 WDR20Q8TBZ3 569 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 ELP4Q96EB1 424 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 CAPNS2Q96L46 248 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 PAPOLGQ9BWT3 736 aaKnown RBP8.26□□□□□ -1.09
CSMD1-206ENST00000520002 FN3KQ9H479 309 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 FNIP2Q9P278 1114 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 PRAMEF11O60813 436 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 FBXO24O75426 580 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 RHCEP18577 417 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 TM4SF1P30408 202 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 HLA-FP30511 346 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 SCNN1AP37088 669 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 ZNF678Q5SXM1 525 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 FAM185AQ8N0U4 392 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 OR4C15Q8NGM1 316 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 OR2M2Q96R28 347 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 DNTTIP1Q9H147 329 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 KLHL9Q9P2J3 617 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 FBXL2Q9UKC9 423 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 C5P01031 1676 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 PRKYO43930 277 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 CACNG3O60359 315 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 POLR2CP19387 275 aaPredicted RBP8.26□□□□□ -1.09
CSMD1-206ENST00000520002 DPY19L2P1Q6NXN4 242 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 TIFABQ6ZNK6 161 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 GLYATL2Q8WU03 294 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 CNN2Q99439 309 aaKnown RBP8.26□□□□□ -1.09
CSMD1-206ENST00000520002 FEVQ99581 238 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 IL20RAQ9UHF4 553 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 A0A1B0GUL6 1792 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 POLR2AP24928 1970 aaKnown RBP8.26□□□□□ -1.09
CSMD1-206ENST00000520002 NOTCH3Q9UM47 2321 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 TMEM221A6NGB7 291 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 ZNF780AO75290 641 aaPredicted RBP8.26□□□□□ -1.09
CSMD1-206ENST00000520002 BDH1Q02338 343 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 ARHGAP1Q07960 439 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 PAFAH1B3Q15102 231 aaKnown RBP8.26□□□□□ -1.09
CSMD1-206ENST00000520002 NNATQ16517 81 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 INAVAQ3KP66 663 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 LAS2Q8IYD9 372 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 OR7G3Q8NG95 312 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 SETD7Q8WTS6 366 aaKnown RBP8.26□□□□□ -1.09
CSMD1-206ENST00000520002 CICQ96RK0 1608 aaPredicted RBP8.26□□□□□ -1.09
CSMD1-206ENST00000520002 A0A0B4J2A0 478 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 SLC10A3P09131 477 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 ZNF30P17039 623 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 MAOBP27338 520 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 HTR1EP28566 365 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 CAV2P51636 162 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 FCN2Q15485 313 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 OR2T33Q8NG76 320 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 NT5C3BQ969T7 300 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 MRPL38Q96DV4 380 aaKnown RBP8.26□□□□□ -1.09
CSMD1-206ENST00000520002 MCHR1Q99705 422 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 DHRS9Q9BPW9 319 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 CRTAC1Q9NQ79 661 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 SHPKQ9UHJ6 478 aa8.26□□□□□ -1.09
CSMD1-206ENST00000520002 PLSCR1O15162 318 aa8.25□□□□□ -1.09
CSMD1-206ENST00000520002 LILRB5O75023 590 aa8.25□□□□□ -1.09
CSMD1-206ENST00000520002 ADAP00813 363 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms