RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 STT3BQ8TCJ2 826 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 FBLIM1Q8WUP2 373 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 TSLPQ969D9 159 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 ALPK1Q96QP1 1244 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 GABARAPL3Q9BY60 117 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 ING2Q9H160 280 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 PIGUQ9H490 435 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 NDRG4Q9ULP0 352 aaKnown RBP13.45□□□□□ -0.26
CLN8-204ENST00000519254 ZNF292O60281 2723 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 NUP210LQ5VU65 1888 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 CBX7O95931 251 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 ALPPP05187 535 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 ZGLP1P0C6A0 271 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 ANXA8P13928 327 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 NR1H2P55055 460 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 TUBA4AP68366 448 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 MAP4K2Q12851 820 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 NPRL3Q12980 569 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 DUSP8Q13202 625 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 KEAP1Q14145 624 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 MEP1AQ16819 746 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 NADK2Q4G0N4 442 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 COLEC12Q5KU26 742 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 FAAH2Q6GMR7 532 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 ZNF770Q6IQ21 691 aaPredicted RBP13.45□□□□□ -0.26
CLN8-204ENST00000519254 TSPYL5Q86VY4 417 aaPredicted RBP13.45□□□□□ -0.26
CLN8-204ENST00000519254 VRK2Q86Y07 508 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 TMEM151BQ8IW70 566 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 PHF10Q8WUB8 498 aaKnown RBP13.45□□□□□ -0.26
CLN8-204ENST00000519254 RBM18Q96H35 190 aaKnown RBP13.45□□□□□ -0.26
CLN8-204ENST00000519254 DGAT2Q96PD7 388 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 NIPSNAP1Q9BPW8 284 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 DDA1Q9BW61 102 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 VN1R1Q9GZP7 353 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 CXorf21Q9HAI6 301 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 TUBA8Q9NY65 449 aaPredicted RBP13.45□□□□□ -0.26
CLN8-204ENST00000519254 A4GNTQ9UNA3 340 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 CHST2Q9Y4C5 530 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 A0A087WXM4 84 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 TRBV4-1A0A0J9YWV2 114 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 C9orf172C9J069 976 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 CCNB2O95067 398 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 IL7RP16871 459 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 CBLP22681 906 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 ALDH3B2P48448 385 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 EFNA3P52797 238 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 TPD52P55327 224 aaPredicted RBP13.44□□□□□ -0.26
CLN8-204ENST00000519254 FOXD4Q12950 439 aaPredicted RBP13.44□□□□□ -0.26
CLN8-204ENST00000519254 NPTX1Q15818 432 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 ZNF311Q5JNZ3 666 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 C6orf141Q5SZD1 244 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 TMEM164Q5U3C3 297 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 TYW3Q6IPR3 259 aaKnown RBP13.44□□□□□ -0.26
CLN8-204ENST00000519254 ZCCHC12Q6PEW1 402 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 OVCH1Q7RTY7 1134 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 VWA5B2Q8N398 1253 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 CDRT4Q8N9R6 151 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 OR6T1Q8NGN1 323 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 HDAC2Q92769 488 aaKnown RBP13.44□□□□□ -0.26
CLN8-204ENST00000519254 HOXB13Q92826 284 aaPredicted RBP13.44□□□□□ -0.26
CLN8-204ENST00000519254 SDF2Q99470 211 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 PITX2Q99697 317 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 ZPBPQ9BS86 351 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 FUZQ9BT04 418 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 PAPOLBQ9NRJ5 636 aaKnown RBP13.44□□□□□ -0.26
CLN8-204ENST00000519254 DUSP22Q9NRW4 184 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 PNO1Q9NRX1 252 aaKnown RBP13.44□□□□□ -0.26
CLN8-204ENST00000519254 FOXJ2Q9P0K8 574 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 GPN3Q9UHW5 284 aaPredicted RBP13.44□□□□□ -0.26
CLN8-204ENST00000519254 MKLN1Q9UL63 735 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 SLC9A8Q9Y2E8 581 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 MMACHCQ9Y4U1 282 aa13.44□□□□□ -0.26
CLN8-204ENST00000519254 ARRDC5A6NEK1 342 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 A8MUA0 341 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 SYT5O00445 386 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 OR6B1O95007 311 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 TNFSF15O95150 251 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 H1F0P07305 194 aaKnown RBP13.43□□□□□ -0.26
CLN8-204ENST00000519254 ALOX5P09917 674 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 HLCSP50747 726 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 RPS6KA3P51812 740 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 PGDP52209 483 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 RPP38P78345 283 aaKnown RBP13.43□□□□□ -0.26
CLN8-204ENST00000519254 RHAGQ02094 409 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 PIN1Q13526 163 aaPredicted RBP13.43□□□□□ -0.26
CLN8-204ENST00000519254 SEC23BQ15437 767 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 NSDHLQ15738 373 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 RBM48Q5RL73 367 aaKnown RBP13.43□□□□□ -0.26
CLN8-204ENST00000519254 DHRS4L2Q6PKH6 230 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 QSOX2Q6ZRP7 698 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 TMPRSS12Q86WS5 348 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 CCDC71Q8IV32 467 aaPredicted RBP13.43□□□□□ -0.26
CLN8-204ENST00000519254 LRFN5Q96NI6 719 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 STACQ99469 402 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 ARHGDIGQ99819 225 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 TGIF2Q9GZN2 237 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 MTHFD2LQ9H903 347 aaPredicted RBP13.43□□□□□ -0.26
CLN8-204ENST00000519254 C14orf105Q9NVL8 296 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 POFUT2Q9Y2G5 429 aa13.43□□□□□ -0.26
CLN8-204ENST00000519254 GPR55Q9Y2T6 319 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms