RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 RFXANKO14593 260 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 SUSD5O60279 629 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 HCN1O60741 890 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 SEMA7AO75326 666 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 PTGS2P35354 604 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 CHI3L1P36222 383 aaPredicted RBP20.07■□□□□ 0.8
VEGFA-217ENST00000518538 CDKN2CP42773 168 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 CA7P43166 264 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 CLK3P49761 638 aaKnown RBP20.07■□□□□ 0.8
VEGFA-217ENST00000518538 CASP6P55212 293 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 RCAN2Q14206 197 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 SQLEQ14534 574 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 GRAMD1BQ3KR37 738 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 TIGD2Q4W5G0 525 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 CCNJQ5T5M9 372 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 GALNT10Q86SR1 603 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 OR5D16Q8NGK9 328 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 LDAHQ9H6V9 325 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 TRIM33Q9UPN9 1127 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 KCNE3Q9Y6H6 103 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 RELNP78509 3460 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 ZGRF1Q86YA3 2104 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 NINQ8N4C6 2090 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 TRGV5A0A0B4J1U4 118 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 TRGV8A0A0C4DH27 118 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 A0A1B0GUH1 482 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 ADAM10O14672 748 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 ZNHIT1O43257 154 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 SCO2O43819 266 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 CBR3O75828 277 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 AGFG2O95081 481 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 HPNP05981 417 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 NGFRP08138 427 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 UBAP2LQ14157 1087 aaKnown RBP20.06■□□□□ 0.8
VEGFA-217ENST00000518538 DCST2Q5T1A1 773 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 C1QL3Q5VWW1 255 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 ZNF621Q6ZSS3 439 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 ZAR1Q86SH2 424 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 PLCZ1Q86YW0 608 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 RELTQ969Z4 430 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 VPS33AQ96AX1 596 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 ITCHQ96J02 903 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 OR51I1Q9H343 314 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 SDHAF3Q9NRP4 125 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 FBXO34Q9NWN3 711 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 ERRFI1Q9UJM3 462 aaPredicted RBP20.06■□□□□ 0.8
VEGFA-217ENST00000518538 HRH3Q9Y5N1 445 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 POLEQ07864 2286 aa20.06■□□□□ 0.8
VEGFA-217ENST00000518538 NUP214P35658 2090 aaPredicted RBP20.06■□□□□ 0.8
VEGFA-217ENST00000518538 RP1L1Q8IWN7 2480 aaPredicted RBP20.05■□□□□ 0.8
VEGFA-217ENST00000518538 OR14I1A6ND48 311 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 AQP7O14520 342 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 PRRG2O14669 202 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 LRRTM2O43300 516 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 TRAPPC6AO75865 159 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 AK1P00568 194 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 NCF2P19878 526 aaPredicted RBP20.05■□□□□ 0.8
VEGFA-217ENST00000518538 ATP6V1C1P21283 382 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 TBXA2RP21731 343 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 C3AR1Q16581 482 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 METTL21CQ5VZV1 264 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 BLOC1S3Q6QNY0 202 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 FUNDC1Q8IVP5 155 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 OR4C3Q8NH37 302 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 NEIL3Q8TAT5 605 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 FAM57AQ8TBR7 257 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 DTNBP1Q96EV8 351 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 TMEM120AQ9BXJ8 343 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 TBL1XR1Q9BZK7 514 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 SLC6A15Q9H2J7 730 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 RABEP2Q9H5N1 569 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 EXO5Q9H790 373 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 UBQLN4Q9NRR5 601 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 CCDC167Q9P0B6 97 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 PPP4R1LQ9P1A2 415 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 TINAGQ9UJW2 476 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 TENM4Q6N022 2769 aa20.05■□□□□ 0.8
VEGFA-217ENST00000518538 OXSR1O95747 527 aaPredicted RBP20.04■□□□□ 0.8
VEGFA-217ENST00000518538 AGR2O95994 175 aa20.04■□□□□ 0.8
VEGFA-217ENST00000518538 GSNP06396 782 aa20.04■□□□□ 0.8
VEGFA-217ENST00000518538 ZCCHC18P0CG32 403 aa20.04■□□□□ 0.8
VEGFA-217ENST00000518538 KHKP50053 298 aa20.04■□□□□ 0.8
VEGFA-217ENST00000518538 TOMM20Q15388 145 aa20.04■□□□□ 0.8
VEGFA-217ENST00000518538 CGB2Q6NT52 195 aa20.04■□□□□ 0.8
VEGFA-217ENST00000518538 MARCH3Q86UD3 253 aa20.04■□□□□ 0.8
VEGFA-217ENST00000518538 CHDHQ8NE62 594 aaPredicted RBP20.04■□□□□ 0.8
VEGFA-217ENST00000518538 PHF12Q96QT6 1004 aa20.04■□□□□ 0.8
VEGFA-217ENST00000518538 RTN4RQ9BZR6 473 aa20.04■□□□□ 0.8
VEGFA-217ENST00000518538 ZNF385DQ9H6B1 395 aa20.04■□□□□ 0.8
VEGFA-217ENST00000518538 SH3BGRL2Q9UJC5 107 aa20.04■□□□□ 0.8
VEGFA-217ENST00000518538 MYO18BQ8IUG5 2567 aa20.04■□□□□ 0.8
VEGFA-217ENST00000518538 ALG1L2C9J202 215 aa20.03■□□□□ 0.8
VEGFA-217ENST00000518538 NR5A2O00482 541 aa20.03■□□□□ 0.8
VEGFA-217ENST00000518538 TPOP07202 933 aa20.03■□□□□ 0.8
VEGFA-217ENST00000518538 ENDOUP21128 410 aaKnown RBP20.03■□□□□ 0.8
VEGFA-217ENST00000518538 TRPC1P48995 793 aa20.03■□□□□ 0.8
VEGFA-217ENST00000518538 CASP9P55211 416 aa20.03■□□□□ 0.8
VEGFA-217ENST00000518538 TXNL4AP83876 142 aaKnown RBP20.03■□□□□ 0.8
VEGFA-217ENST00000518538 STX5Q13190 355 aa20.03■□□□□ 0.8
VEGFA-217ENST00000518538 AGKQ53H12 422 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms