RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 HSPA12BQ96MM6 686 aa17.15■□□□□ 0.34
SDC2-202ENST00000518385 C17orf62Q9BQA9 187 aa17.15■□□□□ 0.34
SDC2-202ENST00000518385 TSSK6Q9BXA6 273 aa17.15■□□□□ 0.34
SDC2-202ENST00000518385 FGF20Q9NP95 211 aaPredicted RBP17.15■□□□□ 0.34
SDC2-202ENST00000518385 RPRD1BQ9NQG5 326 aaKnown RBP17.15■□□□□ 0.34
SDC2-202ENST00000518385 SNTG1Q9NSN8 517 aa17.15■□□□□ 0.34
SDC2-202ENST00000518385 EXOSC1Q9Y3B2 195 aaKnown RBP17.15■□□□□ 0.34
SDC2-202ENST00000518385 NUP214P35658 2090 aaPredicted RBP17.14■□□□□ 0.33
SDC2-202ENST00000518385 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 BTN3A3O00478 584 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 SLC30A4O14863 429 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 ERI3O43414 337 aaKnown RBP17.14■□□□□ 0.33
SDC2-202ENST00000518385 C1QBP02746 253 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 WNT1P04628 370 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 PRKAR1AP10644 381 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 MYL12AP19105 171 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 ATP5A1P25705 553 aaKnown RBP17.14■□□□□ 0.33
SDC2-202ENST00000518385 MAOBP27338 520 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 SOAT1P35610 550 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 OR1E2P47887 323 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 FNTBP49356 437 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 CRISP3P54108 245 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 ANGPT1Q15389 498 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 SEC23BQ15437 767 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 PRRT3Q5FWE3 981 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 NDUFAF5Q5TEU4 345 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 PLET1Q6UQ28 207 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 LAPTM4BQ86VI4 370 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 TMEFF1Q8IYR6 380 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 C1orf216Q8TAB5 229 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 JPH3Q8WXH2 748 aaPredicted RBP17.14■□□□□ 0.33
SDC2-202ENST00000518385 DNASE2BQ8WZ79 361 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 GAL3ST3Q96A11 431 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 MARVELD3Q96A59 401 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 NEDD4LQ96PU5 975 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 ZNF607Q96SK3 696 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 GTPBP2Q9BX10 602 aaKnown RBP17.14■□□□□ 0.33
SDC2-202ENST00000518385 AICDAQ9GZX7 198 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 CXorf36Q9H7Y0 433 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 PRDM9Q9NQV7 894 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 TXNL4BQ9NX01 149 aaKnown RBP17.14■□□□□ 0.33
SDC2-202ENST00000518385 ING3Q9NXR8 418 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 SATB2Q9UPW6 733 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 LRP4O75096 1905 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 ABCA7Q8IZY2 2146 aa17.14■□□□□ 0.33
SDC2-202ENST00000518385 CEP192Q8TEP8 1941 aa17.13■□□□□ 0.33
SDC2-202ENST00000518385 URADA6NGE7 173 aa17.13■□□□□ 0.33
SDC2-202ENST00000518385 LAMTOR5O43504 91 aa17.13■□□□□ 0.33
SDC2-202ENST00000518385 CSF3P09919 207 aa17.13■□□□□ 0.33
SDC2-202ENST00000518385 RAB40BQ12829 278 aa17.13■□□□□ 0.33
SDC2-202ENST00000518385 SLAMF1Q13291 335 aa17.13■□□□□ 0.33
SDC2-202ENST00000518385 ZNF628Q5EBL2 1059 aa17.13■□□□□ 0.33
SDC2-202ENST00000518385 MZT2AQ6P582 158 aa17.13■□□□□ 0.33
SDC2-202ENST00000518385 CREB3L2Q70SY1 520 aa17.13■□□□□ 0.33
SDC2-202ENST00000518385 LAX1Q8IWV1 398 aa17.13■□□□□ 0.33
SDC2-202ENST00000518385 ACOT4Q8N9L9 421 aa17.13■□□□□ 0.33
SDC2-202ENST00000518385 AVL9Q8NBF6 648 aa17.13■□□□□ 0.33
SDC2-202ENST00000518385 FLVCR1-AS1Q8TAF5 88 aa17.13■□□□□ 0.33
SDC2-202ENST00000518385 TMEM163Q8TC26 289 aa17.13■□□□□ 0.33
SDC2-202ENST00000518385 MOAP1Q96BY2 351 aa17.13■□□□□ 0.33
SDC2-202ENST00000518385 DIRAS2Q96HU8 199 aa17.13■□□□□ 0.33
SDC2-202ENST00000518385 POLR2J3Q9H1A7 115 aaKnown RBP17.13■□□□□ 0.33
SDC2-202ENST00000518385 SLC35C2Q9NQQ7 365 aa17.13■□□□□ 0.33
SDC2-202ENST00000518385 PAQR5Q9NXK6 330 aaPredicted RBP17.13■□□□□ 0.33
SDC2-202ENST00000518385 SSX4O60224 188 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 SLC43A1O75387 559 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 CDRT1O95170 752 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 TSPAN19P0C672 248 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 ELAVL4P26378 380 aaKnown RBP17.12■□□□□ 0.33
SDC2-202ENST00000518385 NTSP30990 170 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 MAP2K3P46734 347 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 ANXA11P50995 505 aaKnown RBP17.12■□□□□ 0.33
SDC2-202ENST00000518385 WNT4P56705 351 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 UBE2IP63279 158 aaKnown RBP17.12■□□□□ 0.33
SDC2-202ENST00000518385 MANEAQ5SRI9 462 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 BHLHB9Q6PI77 547 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 TMEM64Q6YI46 380 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 ZNF793Q6ZN11 406 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 ASPGQ86U10 573 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 C1orf210Q8IVY1 113 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 C19orf18Q8NEA5 215 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 TM4SF19Q96DZ7 209 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 ZNF354BQ96LW1 612 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 SOSTQ9BQB4 213 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 SPATA5L1Q9BVQ7 753 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 KLHL31Q9H511 634 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 RBFOX1Q9NWB1 397 aaKnown RBP17.12■□□□□ 0.33
SDC2-202ENST00000518385 TEX10Q9NXF1 929 aaPredicted RBP17.12■□□□□ 0.33
SDC2-202ENST00000518385 ACTR10Q9NZ32 417 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 PTTG3PQ9NZH4 202 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 CPNE7Q9UBL6 633 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 MAP4K5Q9Y4K4 846 aa17.12■□□□□ 0.33
SDC2-202ENST00000518385 C2orf74A8MZ97 194 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 CYP7B1O75881 506 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 SLC35G6P0C7Q6 338 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 GZMKP49863 264 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 FAPQ12884 760 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 TRIQKQ629K1 86 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 CD200R1LQ6Q8B3 271 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 PRICKLE2Q7Z3G6 844 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms