RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 COMMD4Q9H0A8 199 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 LTB4R2Q9NPC1 389 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 SAGE1Q9NXZ1 904 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 SLC35F4A4IF30 521 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 CD8B2A6NJW9 211 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 MAN2B1O00754 1011 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 UBFD1O14562 309 aaKnown RBP12.41□□□□□ -0.42
TCOF1-213ENST00000514442 ZNF821O75541 412 aaPredicted RBP12.41□□□□□ -0.42
TCOF1-213ENST00000514442 F11P03951 625 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 RPS17P08708 135 aaKnown RBP12.41□□□□□ -0.42
TCOF1-213ENST00000514442 CD8BP10966 210 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 HK1P19367 917 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 CDONQ4KMG0 1287 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 MANEALQ5VSG8 457 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 ZNF852Q6ZMS4 543 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 TMEM156Q8N614 296 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 PHOSPHO2Q8TCD6 241 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 ADAMTS19Q8TE59 1207 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 ZNF419Q96HQ0 510 aaPredicted RBP12.41□□□□□ -0.42
TCOF1-213ENST00000514442 CD180Q99467 661 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 TCEAL7Q9BRU2 100 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 CPEB1Q9BZB8 566 aaKnown RBP12.41□□□□□ -0.42
TCOF1-213ENST00000514442 RNF167Q9H6Y7 350 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 ABI3Q9P2A4 366 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 CDK5RAP2Q96SN8 1893 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 CTBSQ01459 385 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 IFITM2Q01629 132 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 HHEXQ03014 270 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 KCTD11Q693B1 232 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 PRSS42Q7Z5A4 293 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 NEIL2Q969S2 332 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 DTD2Q96FN9 168 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 ZDHHC12Q96GR4 267 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 HHIPQ96QV1 700 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 COL4A1P02462 1669 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 DOCK2Q92608 1830 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 C1orf226A1L170 272 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 C1orf196B1AJZ1 125 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 M0R129 80 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 C1SP09871 688 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 GINS1Q14691 196 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 RNF175Q8N4F7 328 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 TMEM30AQ9NV96 361 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 A0A1B0GVT2 93 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 TEX46H3BTG2 121 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 RCBTB2O95199 551 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 RAF1P04049 648 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 OPCMLQ14982 345 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 GRHL2Q6ISB3 625 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 MSANTD1Q6ZTZ1 278 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 HRASLS5Q96KN8 279 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 ZBP1Q9H171 429 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 NANSQ9NR45 359 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 CENPMQ9NSP4 180 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 TAS2R10Q9NYW0 307 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 TMEM5Q9Y2B1 443 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 NME7Q9Y5B8 376 aa12.41□□□□□ -0.42
TCOF1-213ENST00000514442 GON4LQ3T8J9 2241 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 EVPLQ92817 2033 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 ANXA2P2A6NMY6 339 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 RGS9O75916 674 aaPredicted RBP12.4□□□□□ -0.42
TCOF1-213ENST00000514442 SCG5P05408 212 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 ANXA2P07355 339 aaKnown RBP12.4□□□□□ -0.42
TCOF1-213ENST00000514442 HEXBP07686 556 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 TNFRSF1BP20333 461 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 RPS15AP62244 130 aaKnown RBP12.4□□□□□ -0.42
TCOF1-213ENST00000514442 AAK1Q2M2I8 961 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 ZBTB37Q5TC79 503 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 ELP2Q6IA86 826 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.4□□□□□ -0.429e-8■□□□□ 9.8
TCOF1-213ENST00000514442 CLDN22Q8N7P3 220 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 CDCA3Q99618 268 aaPredicted RBP12.4□□□□□ -0.42
TCOF1-213ENST00000514442 APOOQ9BUR5 198 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 OR10A4Q9H209 315 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 METTL7AQ9H8H3 244 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 CD207Q9UJ71 328 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 CA5BQ9Y2D0 317 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 PCDHGB1Q9Y5G3 927 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 FAM221BA6H8Z2 402 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 OR5K4A6NMS3 321 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 PRAF2O60831 178 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 CD2P06729 351 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 CD1EP15812 388 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 HNRNPA2B1P22626 353 aaKnown RBP12.4□□□□□ -0.42
TCOF1-213ENST00000514442 AK4P27144 223 aaPredicted RBP12.4□□□□□ -0.42
TCOF1-213ENST00000514442 P2RY2P41231 377 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 CDKN2CP42773 168 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 SHC2P98077 582 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 SLC3A1Q07837 685 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 MLLT11Q13015 90 aaPredicted RBP12.4□□□□□ -0.42
TCOF1-213ENST00000514442 YIF1BQ5BJH7 314 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 TMEM164Q5U3C3 297 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 C1orf189Q5VU69 101 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 FIGLAQ6QHK4 219 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 LRRC25Q8N386 305 aaPredicted RBP12.4□□□□□ -0.42
TCOF1-213ENST00000514442 ZSCAN1Q8NBB4 408 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 WFDC5Q8TCV5 224 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 TANKQ92844 425 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 HAVCR1Q96D42 359 aa12.4□□□□□ -0.42
TCOF1-213ENST00000514442 SECISBP2Q96T21 854 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms