RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	HSD11B1L	Q7Z5J1	315 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	TMEM123	Q8N131	208 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	LRRC75A-AS1	Q8N1F1	130 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	AQP11	Q8NBQ7	271 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	OR5D13	Q8NGL4	314 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	PIGC	Q92535	297 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	DNAJA3	Q96EY1	480 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	COQ2	Q96H96	371 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	C7orf34	Q96L11	122 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SLC39A3	Q9BRY0	314 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	POLR3F	Q9H1D9	316 aa	Predicted RBP	4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	PARL	Q9H300	379 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	UFSP2	Q9NUQ7	469 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	CDH9	Q9ULB4	789 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	AUP1	Q9Y679	476 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	KANK1	Q14678	1352 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	IGHV4-30-2	A0A087WSY4	118 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006		A0A087X002	238 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	TRBV7-9	A0A0J9YWB2	115 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	FAM240B	A0A1B0GVZ2	78 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006		A0A1W2PNV4	684 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	HELT	A6NFD8	242 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	PDHX	O00330	501 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	TYROBP	O43914	113 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SORBS2	O94875	1100 aa	Known RBP	4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ZNF432	O94892	652 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	JCHAIN	P01591	159 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	IGHG1	P01857	330 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	AMBP	P02760	352 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ZSCAN5DP	P0CG00	497 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	BCKDHA	P12694	445 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ZNF26	P17031	533 aa	Predicted RBP	4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	XRCC1	P18887	633 aa	Predicted RBP	4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	TPSB2	P20231	275 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	PCMT1	P22061	227 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	LAP3	P28838	519 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	GSC	P56915	257 aa	Predicted RBP	4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	RPL23A	P62750	156 aa	Known RBP	4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	RPS6	P62753	249 aa	Known RBP	4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	BDH1	Q02338	343 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	RGS1	Q08116	209 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ELAVL3	Q14576	367 aa	Known RBP	4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	GANAB	Q14697	944 aa	Known RBP	4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	TPSAB1	Q15661	275 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	IMMT	Q16891	758 aa	Known RBP	4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	GGTA1P	Q4G0N0	100 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	NOTCH2NL	Q7Z3S9	236 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	CEACAM19	Q7Z692	300 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	NR2C2AP	Q86WQ0	139 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	CNIH3	Q8TBE1	160 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	C11orf24	Q96F05	449 aa	Predicted RBP	4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	CNOT6L	Q96LI5	555 aa	Known RBP	4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	AMDHD1	Q96NU7	426 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	HSD17B14	Q9BPX1	270 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	TMEM121	Q9BTD3	319 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	PKIB	Q9C010	78 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	METTL7A	Q9H8H3	244 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	NSD2	O96028	1365 aa		4.14	□□□□□ -1.75
CALCOCO2-222	ENST00000514006		A0A0U1RQS6	177 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006		K7EQG2	157 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	EFNA2	O43921	213 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	KLHL41	O60662	606 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	N4BP1	O75113	896 aa	Known RBP	4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ERLIN1	O75477	346 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ECI2	O75521	394 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ZFAND5	O76080	213 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	DUS4L	O95620	317 aa	Known RBP	4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	PNMT	P11086	282 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	PGC	P20142	388 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	CCNC	P24863	283 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	HPCAL1	P37235	193 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	POU3F4	P49335	361 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	NOVA1	P51513	510 aa	Known RBP	4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	RIDA	P52758	137 aa	Known RBP	4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	AP3M2	P53677	418 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	MFAP2	P55001	183 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	NDUFV3	P56181	108 aa	Known RBP	4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	PLOD1	Q02809	727 aa	Predicted RBP	4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	FASTKD3	Q14CZ7	662 aa	Known RBP	4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SEL1L2	Q5TEA6	688 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ACSM5	Q6NUN0	579 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	DOK6	Q6PKX4	331 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	CYS1	Q717R9	158 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	CCDC80	Q76M96	950 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	UBE2J2	Q8N2K1	259 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	NECAB1	Q8N987	351 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	M1AP	Q8TC57	530 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	TBCK	Q8TEA7	893 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	RPRD1A	Q96P16	312 aa	Predicted RBP	4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	NPY6R	Q99463	290 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	UPF3A	Q9H1J1	476 aa	Known RBP	4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ZDHHC18	Q9NUE0	388 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SMOX	Q9NWM0	555 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	THAP10	Q9P2Z0	257 aa	Predicted RBP	4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	PCSK1N	Q9UHG2	260 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	GMPPB	Q9Y5P6	360 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	CPQ	Q9Y646	472 aa		4.13	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	TEX48	A0A1B0GUV7	120 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ARHGEF35	A5YM69	484 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms