RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 MAOAP21397 527 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 IFNA8P32881 189 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 EMX1Q04741 257 aaPredicted RBP13.89□□□□□ -0.19
VCAN-211ENST00000513984 SIGLEC14Q08ET2 396 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 BIKQ13323 160 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 ZNHIT3Q15649 155 aaPredicted RBP13.89□□□□□ -0.19
VCAN-211ENST00000513984 MAPK14Q16539 360 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 ENTPD8Q5MY95 495 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 GPR107Q5VW38 600 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 SLX4IPQ5VYV7 408 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 PRSS48Q7RTY5 328 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 CCDC74AQ96AQ1 378 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 VSTM2LQ96N03 204 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 MCHR1Q99705 422 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 RHNO1Q9BSD3 238 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 PRR14Q9BWN1 585 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 CCDC90BQ9GZT6 254 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 FKBP14Q9NWM8 211 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 KCNE5Q9UJ90 142 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 A0A087WUU8 490 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 CLDN24A6NM45 220 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 PRAMEF2O60811 474 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 KCNK2O95069 426 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 PCSK6P29122 969 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 SSTR4P31391 388 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 CNR2P34972 360 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 ZNF136P52737 540 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 FUT7Q11130 342 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 SERTAD2Q14140 314 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 PLK5Q496M5 336 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 TMEM236Q5W0B7 351 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 FIGNL1Q6PIW4 674 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 TTLL10Q6ZVT0 673 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 PLEKHM3Q6ZWE6 761 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 OR1L3Q8NH93 324 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 FAR1Q8WVX9 515 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 C12orf43Q96C57 262 aaKnown RBP13.88□□□□□ -0.19
VCAN-211ENST00000513984 OR1F2PQ96R84 312 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 POLR2J2Q9GZM3 115 aaKnown RBP13.88□□□□□ -0.19
VCAN-211ENST00000513984 LANCL2Q9NS86 450 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 PSORS1C1Q9UIG5 152 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 GMEB2Q9UKD1 530 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 MMACHCQ9Y4U1 282 aa13.88□□□□□ -0.19
VCAN-211ENST00000513984 HRKO00198 91 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 PEX12O00623 359 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 LAMTOR5O43504 91 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 HYAL3O43820 417 aaPredicted RBP13.87□□□□□ -0.19
VCAN-211ENST00000513984 TRMUO75648 421 aaKnown RBP13.87□□□□□ -0.19
VCAN-211ENST00000513984 SOX14O95416 240 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 MT-ND2P03891 347 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 GSTM3P21266 225 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 POU1F1P28069 291 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 HOXD11P31277 338 aaPredicted RBP13.87□□□□□ -0.19
VCAN-211ENST00000513984 MASP1P48740 699 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 MVKQ03426 396 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 ZNF267Q14586 743 aaPredicted RBP13.87□□□□□ -0.19
VCAN-211ENST00000513984 SNAP47Q5SQN1 464 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 MRPL2Q5T653 305 aaKnown RBP13.87□□□□□ -0.19
VCAN-211ENST00000513984 C12orf73Q69YU5 71 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 ERI1Q8IV48 349 aaKnown RBP13.87□□□□□ -0.19
VCAN-211ENST00000513984 SVOPQ8N4V2 548 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 TOR1AIP2Q8NFQ8 470 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 OR4C6Q8NH72 309 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 SAP25Q8TEE9 199 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 MPP4Q96JB8 637 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 ZNF768Q9H5H4 540 aaKnown RBP13.87□□□□□ -0.19
VCAN-211ENST00000513984 EVA1AQ9H8M9 152 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 NECTIN3Q9NQS3 549 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 MAU2Q9Y6X3 613 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 NPIPA5A0A0B4J1W7 369 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 SH3D21A4FU49 640 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 CDHR4A6H8M9 788 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 OR2W5A6NFC9 320 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 TRIM64BA6NI03 449 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 CLCA1A8K7I4 914 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 ZNF99A8MXY4 864 aaPredicted RBP13.87□□□□□ -0.19
VCAN-211ENST00000513984 NPIPA7E9PJI5 369 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 H3BMQ9 156 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 TOX3O15405 576 aaPredicted RBP13.87□□□□□ -0.19
VCAN-211ENST00000513984 THY1P04216 161 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 NPIPA8P0DM63 369 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 FOLR1P15328 257 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 ACVR2AP27037 513 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 IFNGR2P38484 337 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 TMBIM6P55061 237 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 LSM11P83369 360 aaKnown RBP eCLIP13.87□□□□□ -0.19
VCAN-211ENST00000513984 HOXC5Q00444 222 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 SQSTM1Q13501 440 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 DECR1Q16698 335 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 PEAR1Q5VY43 1037 aaPredicted RBP13.87□□□□□ -0.19
VCAN-211ENST00000513984 AHSA2Q719I0 299 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 GDF7Q7Z4P5 450 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 RANBP3LQ86VV4 465 aaPredicted RBP13.87□□□□□ -0.19
VCAN-211ENST00000513984 GATAD2AQ86YP4 633 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 MAML2Q8IZL2 1156 aaPredicted RBP13.87□□□□□ -0.19
VCAN-211ENST00000513984 ZFAND2BQ8WV99 257 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 SLC41A3Q96GZ6 507 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 COG8Q96MW5 612 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 GPA33Q99795 319 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 NUDT22Q9BRQ3 303 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms