RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 BCAS4Q8TDM0 211 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 PAQR8Q8TEZ7 354 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 XAGE5Q8WWM1 108 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 WNT2BQ93097 391 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 ARSGQ96EG1 525 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 JSRP1Q96MG2 331 aaPredicted RBP8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 FRMD6Q96NE9 622 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 STACQ99469 402 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 BTBD2Q9BX70 525 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 RTN4RQ9BZR6 473 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 METTL7AQ9H8H3 244 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 PROK2Q9HC23 129 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 SH2D2AQ9NP31 389 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 SACM1LQ9NTJ5 587 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 TMEM45AQ9NWC5 275 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 TUBA8Q9NY65 449 aaPredicted RBP8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 KLRF1Q9NZS2 232 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 PRRC2CQ9Y520 2896 aaKnown RBP8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 NCKAP5O14513 1909 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 OR6C70A6NIJ9 312 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 LRRC3CA6NJW4 275 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 EIF4E1BA6NMX2 242 aaKnown RBP8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 TTLL8A6PVC2 850 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 FAM166BA8MTA8 275 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 CAPN14A8MX76 684 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 GNB5O14775 395 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 AIM2O14862 343 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 ZNHIT1O43257 154 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 PEX1O43933 1283 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 WISP2O76076 250 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 UTS2O95399 124 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 KRT75O95678 551 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 P04436 131 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 ZCCHC18P0CG32 403 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 TCEA1P23193 301 aaKnown RBP8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 EVI2BP34910 448 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 DSTNP60981 165 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 KCNJ2P63252 427 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 SYPL1Q16563 259 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 NDUFAF6Q330K2 333 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 CYP27C1Q4G0S4 372 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 GPAT3Q53EU6 434 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 RNFT1Q5M7Z0 435 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 SLC22A10Q63ZE4 541 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 ZCCHC12Q6PEW1 402 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 FBXW8Q8N3Y1 598 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 DPP10Q8N608 796 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 ZNF614Q8N883 585 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 GOLM1Q8NBJ4 401 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 TMEM178AQ8NBL3 297 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 OR2M7Q8NG81 312 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 OR52N2Q8NGI0 321 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 MIPOL1Q8TD10 442 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 GRHL3Q8TE85 626 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 MAL2Q969L2 176 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 ROPN1LQ96C74 230 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 CGREF1Q99674 301 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 DOHHQ9BU89 302 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 OSBPL11Q9BXB4 747 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 QRSL1Q9H0R6 528 aaKnown RBP8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 RUBCNLQ9H714 662 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 DUSP22Q9NRW4 184 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 ARL8BQ9NVJ2 186 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 GMPR2Q9P2T1 348 aaKnown RBP8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 MKLN1Q9UL63 735 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 USP22Q9UPT9 525 aa8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 KLF13Q9Y2Y9 288 aaPredicted RBP8.98□□□□□ -0.97
TOPBP1-209ENST00000513818 SPTA1P02549 2419 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 BBIP1A8MTZ0 92 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 B4DXG7 233 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 ADAM10O14672 748 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 TP53I11O14683 189 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 SLC22A2O15244 555 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 SLC28A2O43868 658 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 HS6ST1O60243 411 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 FCMRO60667 390 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 TNFRSF21O75509 655 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 DCTN3O75935 186 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 RASAL1O95294 804 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 CBX6O95503 412 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 OXSR1O95747 527 aaPredicted RBP8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 BCHEP06276 602 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 CHRM4P08173 479 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 ATP6V1C1P21283 382 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 ADSLP30566 484 aaPredicted RBP8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 DCTP40126 519 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 CASP3P42574 277 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 NUDT2P50583 147 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 PNLIPRP2P54317 469 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 PLGLB1Q02325 96 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 CHRNEQ04844 493 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 EFR3AQ14156 821 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 RGNQ15493 299 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 GPR68Q15743 365 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 MAPK11Q15759 364 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 FLYWCH1Q4VC44 716 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 RUNDC3AQ59EK9 446 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 RABL3Q5HYI8 236 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 ATAD3BQ5T9A4 648 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 OR5M10Q6IEU7 315 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms