RNA–Protein interactions for RNA: ENST00000513418.1

SMAD5-208, Transcript of SMAD family member 5, humanhuman

TSL 5

Gene SMAD5, Length 523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-208ENST00000513418 CCDC173Q0VFZ6 552 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 PDE7AQ13946 482 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 KIAA0141Q14154 515 aaPredicted RBP2.32□□□□□ -2.04
SMAD5-208ENST00000513418 RPS6KA1Q15418 735 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 SYCP1Q15431 976 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 MLF2Q15773 248 aaPredicted RBP2.32□□□□□ -2.04
SMAD5-208ENST00000513418 SNRNP35Q16560 246 aaKnown RBP2.32□□□□□ -2.04
SMAD5-208ENST00000513418 EXOC3L4Q17RC7 722 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 SPECC1LQ69YQ0 1117 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 CAPN13Q6MZZ7 669 aaPredicted RBP2.32□□□□□ -2.04
SMAD5-208ENST00000513418 PAQR6Q6TCH4 344 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 PRSS48Q7RTY5 328 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 PRSS42Q7Z5A4 293 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 ITIH5Q86UX2 942 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 LUZP1Q86V48 1076 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 VPS36Q86VN1 386 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 FAM131BQ86XD5 332 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 NEK11Q8NG66 645 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 LRRC15Q8TF66 581 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 UBTD2Q8WUN7 234 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 PRCCQ92733 491 aaPredicted RBP2.32□□□□□ -2.04
SMAD5-208ENST00000513418 TAF4BQ92750 862 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 HAS2Q92819 552 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 PCED1BQ96HM7 432 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 CPB2Q96IY4 423 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 SLC45A3Q96JT2 553 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 CNOT6LQ96LI5 555 aaKnown RBP2.32□□□□□ -2.04
SMAD5-208ENST00000513418 ALKBH3Q96Q83 286 aaPredicted RBP2.32□□□□□ -2.04
SMAD5-208ENST00000513418 LGMNQ99538 433 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 TRPV6Q9H1D0 765 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 LIME1Q9H400 295 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 FAM124BQ9H5Z6 455 aaPredicted RBP2.32□□□□□ -2.04
SMAD5-208ENST00000513418 AGPAT3Q9NRZ7 376 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 RGS18Q9NS28 235 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 SAMSN1Q9NSI8 373 aaKnown RBP2.32□□□□□ -2.04
SMAD5-208ENST00000513418 AGPAT5Q9NUQ2 364 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 DMAC2Q9NW81 257 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 PLEK2Q9NYT0 353 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 RBAKQ9NYW8 714 aaPredicted RBP2.32□□□□□ -2.04
SMAD5-208ENST00000513418 TECRQ9NZ01 308 aaKnown RBP2.32□□□□□ -2.04
SMAD5-208ENST00000513418 ZNF319Q9P2F9 582 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 FETUBQ9UGM5 382 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 KLK13Q9UKR3 277 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 FBXW2Q9UKT8 454 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 KLHDC2Q9Y2U9 406 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 STYXL1Q9Y6J8 313 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 GRIN2DO15399 1336 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 MYH10P35580 1976 aa2.32□□□□□ -2.04
SMAD5-208ENST00000513418 IGLV4-3A0A075B6K6 122 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 LOC390937A0A1W2PQ73 354 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 TMEM129A0AVI4 362 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 FAM149AA5PLN7 773 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 GOLGA8IPA6NC78 632 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 TRIM49BA6NDI0 452 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 GOLGA8JA6NMD2 632 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 SHISA9B4DS77 424 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 ANKRD63C9JTQ0 380 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 TLR4O00206 839 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 CHUKO15111 745 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 INPP4BO15327 924 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 PHF1O43189 567 aaPredicted RBP2.31□□□□□ -2.04
SMAD5-208ENST00000513418 PSMD3O43242 534 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 MED7O43513 233 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 TRAPPC3O43617 180 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 HUS1O60921 280 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 RTN2O75298 545 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 CSO75390 466 aaKnown RBP2.31□□□□□ -2.04
SMAD5-208ENST00000513418 LYNP07948 512 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 IQCF3P0C7M6 154 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 KCNE1P15382 129 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 CD1DP15813 335 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 ZNF18P17022 549 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 CYP3A5P20815 502 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 GLRA1P23415 457 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 SHC1P29353 583 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 OXTRP30559 389 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 CD52P31358 61 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 RPL9P32969 192 aaKnown RBP2.31□□□□□ -2.04
SMAD5-208ENST00000513418 CASP3P42574 277 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 CASP4P49662 377 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 ACOT2P49753 483 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 FHITP49789 147 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 TAF6P49848 677 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 CCL23P55773 120 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 KRTAP10-5P60370 271 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 OSTNP61366 133 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 TNNC1P63316 161 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 TFAMQ00059 246 aaKnown RBP2.31□□□□□ -2.04
SMAD5-208ENST00000513418 CYP24A1Q07973 514 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 RBBP4Q09028 425 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 MGAT3Q09327 533 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 MORF4L2Q15014 288 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 KRT31Q15323 416 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 SIX1Q15475 284 aaPredicted RBP2.31□□□□□ -2.04
SMAD5-208ENST00000513418 ZKSCAN8Q15776 578 aaPredicted RBP2.31□□□□□ -2.04
SMAD5-208ENST00000513418 UPP1Q16831 310 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 LRRC26Q2I0M4 334 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 MS4A18Q3C1V0 323 aa2.31□□□□□ -2.04
SMAD5-208ENST00000513418 ZCWPW2Q504Y3 356 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms