RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 KAT7O95251 611 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 GBX2P52951 348 aaPredicted RBP13.77□□□□□ -0.21
DDR1-271ENST00000513240 PCBP3P57721 371 aaKnown RBP13.77□□□□□ -0.21
DDR1-271ENST00000513240 CSNK1G2P78368 415 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 SSX1Q16384 188 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 FAM209BQ5JX69 171 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 LRFN4Q6PJG9 635 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 ZNF600Q6ZNG1 722 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 CAMKMTQ7Z624 323 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 VRK2Q86Y07 508 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 GDPD1Q8N9F7 314 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 ASB12Q8WXK4 309 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 DIRAS2Q96HU8 199 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 ART5Q96L15 291 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 GPR137Q96N19 417 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 C19orf43Q9BQ61 176 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 PLA2G12AQ9BZM1 189 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 C3orf14Q9HBI5 128 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 ZFR2Q9UPR6 939 aaKnown RBP13.77□□□□□ -0.21
DDR1-271ENST00000513240 A0A075B6Q4 140 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 ISM1B1AKI9 464 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 PDE9AO76083 593 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 HMGN2P05204 90 aaKnown RBP13.77□□□□□ -0.21
DDR1-271ENST00000513240 ARSBP15848 533 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 ELAVL4P26378 380 aaKnown RBP13.77□□□□□ -0.21
DDR1-271ENST00000513240 MAP2K3P46734 347 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 MAN2A2P49641 1150 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 XKP51811 444 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 GRK1Q15835 563 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 TUSC1Q2TAM9 212 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 ZNF542PQ5EBM4 170 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 C9orf50Q5SZB4 431 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 ZNF761Q86XN6 746 aaPredicted RBP13.77□□□□□ -0.21
DDR1-271ENST00000513240 OR5K2Q8NHB8 316 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 SMAP2Q8WU79 429 aaPredicted RBP13.77□□□□□ -0.21
DDR1-271ENST00000513240 C12orf57Q99622 126 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 MARK1Q9P0L2 795 aa13.77□□□□□ -0.21
DDR1-271ENST00000513240 TBC1D3DA0A087WVF3 549 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 TBC1D3IA0A087WXS9 549 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 TBC1D3EA0A087X179 549 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 TBC1D3KA0A087X1G2 549 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 NPIPA5A0A0B4J1W7 369 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 LOC102723532A0A0G2JNH3 316 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 A0A1W2PR48 441 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 TBC1D3FA6NER0 549 aaPredicted RBP13.76□□□□□ -0.21
DDR1-271ENST00000513240 TBC1D3LB9A6J9 549 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 NPIPA7E9PJI5 369 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 FCMRO60667 390 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 RAF1P04049 648 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 CHRM4P08173 479 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 TBC1D3HP0C7X1 549 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 NPIPA8P0DM63 369 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 HAAOP46952 286 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 ELOAQ14241 798 aaKnown RBP13.76□□□□□ -0.21
DDR1-271ENST00000513240 CRB2Q5IJ48 1285 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 TBC1D3GQ6DHY5 549 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 TBC1D3CQ6IPX1 549 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 TRILQ7L0X0 811 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 TBC1D3Q8IZP1 549 aaPredicted RBP13.76□□□□□ -0.21
DDR1-271ENST00000513240 OR6M1Q8NGM8 313 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 OR9A2Q8NGT5 310 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 FANK1Q8TC84 345 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 RELTQ969Z4 430 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 SGTBQ96EQ0 304 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 TMEM106CQ9BVX2 250 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 WDR26Q9H7D7 661 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 CMAHPQ9Y471 501 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 STON1Q9Y6Q2 735 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 DMDP11532 3685 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 ZNF106Q9H2Y7 1883 aaKnown RBP13.76□□□□□ -0.21
DDR1-271ENST00000513240 PLOD3O60568 738 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 PTP4A3O75365 173 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 RB1P06400 928 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 RHCEP18577 417 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 DDX6P26196 483 aaKnown RBP eCLIP13.76□□□□□ -0.21
DDR1-271ENST00000513240 HEPACAMQ14CZ8 416 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 CCDC85BQ15834 202 aaPredicted RBP13.76□□□□□ -0.21
DDR1-271ENST00000513240 FAM46CQ5VWP2 391 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 METRNLQ641Q3 311 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 ZNF782Q6ZMW2 699 aaPredicted RBP13.76□□□□□ -0.21
DDR1-271ENST00000513240 SYT14Q8NB59 555 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 GOT1L1Q8NHS2 421 aaPredicted RBP13.76□□□□□ -0.21
DDR1-271ENST00000513240 SLC9A6Q92581 669 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 MTERF3Q96E29 417 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 GHITMQ9H3K2 345 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 CLN6Q9NWW5 311 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 NDRG2Q9UN36 371 aaKnown RBP13.76□□□□□ -0.21
DDR1-271ENST00000513240 CNTRLQ7Z7A1 2325 aa13.76□□□□□ -0.21
DDR1-271ENST00000513240 FAM240BA0A1B0GVZ2 78 aa13.75□□□□□ -0.21
DDR1-271ENST00000513240 POM121BA6NF01 834 aa13.75□□□□□ -0.21
DDR1-271ENST00000513240 TEX46H3BTG2 121 aa13.75□□□□□ -0.21
DDR1-271ENST00000513240 MRPS14O60783 128 aaKnown RBP13.75□□□□□ -0.21
DDR1-271ENST00000513240 EPPINO95925 133 aa13.75□□□□□ -0.21
DDR1-271ENST00000513240 H1F0P07305 194 aaKnown RBP13.75□□□□□ -0.21
DDR1-271ENST00000513240 RRASP10301 218 aa13.75□□□□□ -0.21
DDR1-271ENST00000513240 MC3RP41968 323 aa13.75□□□□□ -0.21
DDR1-271ENST00000513240 GPM6BQ13491 265 aa13.75□□□□□ -0.21
DDR1-271ENST00000513240 OR4C11Q6IEV9 310 aa13.75□□□□□ -0.21
DDR1-271ENST00000513240 ZC3H14Q6PJT7 736 aaKnown RBP13.75□□□□□ -0.21
DDR1-271ENST00000513240 ZER1Q7Z7L7 766 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms