RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 Q8N9W7 124 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 FIBINQ8TAL6 211 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 TAF4BQ92750 862 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 MCHR2Q969V1 340 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 TMEM45BQ96B21 275 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 NANSQ9NR45 359 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 MMP26Q9NRE1 261 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 DCAF13Q9NV06 445 aaKnown RBP1.17□□□□□ -2.22
PDGFC-208ENST00000512711 EHFQ9NZC4 300 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 OR1A1Q9P1Q5 309 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 NARFQ9UHQ1 456 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 DHRS7Q9Y394 339 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 PLEKHG1Q9ULL1 1385 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 ZMYM6O95789 1325 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 SAGE2PA6NJ88 616 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 ICOSLGO75144 302 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 CABYRO75952 493 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 MMP1P03956 469 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 PCCAP05165 728 aaPredicted RBP1.16□□□□□ -2.22
PDGFC-208ENST00000512711 IGHV4-34P06331 123 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 GSTA1P08263 222 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 STSP08842 583 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 MAGP20916 626 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 CTNNB1P35222 781 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 UGT1A5P35504 534 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 BTDP43251 543 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 CCR6P51684 374 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 APOC4P55056 127 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 SNU13P55769 128 aaKnown RBP1.16□□□□□ -2.22
PDGFC-208ENST00000512711 NOP14P78316 857 aaKnown RBP1.16□□□□□ -2.22
PDGFC-208ENST00000512711 OC90Q02509 493 aaPredicted RBP1.16□□□□□ -2.22
PDGFC-208ENST00000512711 TYSND1Q2T9J0 566 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 AARDQ4LEZ3 155 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 FAM220AQ7Z4H9 259 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 AMZ2Q86W34 360 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 C17orf82Q86X59 251 aaPredicted RBP1.16□□□□□ -2.22
PDGFC-208ENST00000512711 TMEM61Q8N0U2 210 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 MDS2Q8NDY4 140 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 PHF10Q8WUB8 498 aaKnown RBP1.16□□□□□ -2.22
PDGFC-208ENST00000512711 ANKRD49Q8WVL7 239 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 RNF185Q96GF1 192 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 SMIM14Q96QK8 99 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 MBOAT4Q96T53 435 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 TXN2Q99757 166 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 CHRDL1Q9BU40 450 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 FUT8Q9BYC5 575 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 FANCFQ9NPI8 374 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 NDUFA13Q9P0J0 144 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 SPRR3Q9UBC9 169 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 NRBP1Q9UHY1 535 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 LIPT1Q9Y234 373 aa1.16□□□□□ -2.22
PDGFC-208ENST00000512711 CCDC69A6NI79 296 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 K7N7A8 449 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 ZNF264O43296 627 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 STK17BO94768 372 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 INSP01308 110 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 JCHAINP01591 159 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 APRTP07741 180 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 SERPINF2P08697 491 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 UROSP10746 265 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 AQP1P29972 269 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 TCF7P36402 384 aaPredicted RBP1.15□□□□□ -2.23
PDGFC-208ENST00000512711 RPL29P47914 159 aaKnown RBP1.15□□□□□ -2.23
PDGFC-208ENST00000512711 SUCLG1P53597 346 aaKnown RBP1.15□□□□□ -2.23
PDGFC-208ENST00000512711 ZNF154Q13106 437 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 IFI44LQ53G44 452 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 DNAJC21Q5F1R6 531 aaKnown RBP1.15□□□□□ -2.23
PDGFC-208ENST00000512711 PAGE3Q5JUK9 113 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 BEND6Q5SZJ8 279 aaPredicted RBP1.15□□□□□ -2.23
PDGFC-208ENST00000512711 DCST2Q5T1A1 773 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 LIPKQ5VXJ0 399 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 STAC2Q6ZMT1 411 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 SERPINA12Q8IW75 414 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 CCDC36Q8IYA8 594 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 MTURNQ8N3F0 131 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 ART4Q93070 314 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 TADA1Q96BN2 335 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 FGGYQ96C11 551 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 RPUSD4Q96CM3 377 aaKnown RBP1.15□□□□□ -2.23
PDGFC-208ENST00000512711 CCDC51Q96ER9 411 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 VPS39Q96JC1 886 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 MRPL9Q9BYD2 267 aaKnown RBP1.15□□□□□ -2.23
PDGFC-208ENST00000512711 COPS7BQ9H9Q2 264 aaPredicted RBP1.15□□□□□ -2.23
PDGFC-208ENST00000512711 ANKMY1Q9P2S6 941 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 PHF11Q9UIL8 331 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 UBQLN1Q9UMX0 589 aaKnown RBP1.15□□□□□ -2.23
PDGFC-208ENST00000512711 TP53TG5Q9Y2B4 290 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 FKBP7Q9Y680 259 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 GPR179Q6PRD1 2367 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 GRIN2DO15399 1336 aa1.15□□□□□ -2.23
PDGFC-208ENST00000512711 IGLV4-69A0A075B6H9 119 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.14□□□□□ -2.23
PDGFC-208ENST00000512711 IGKV1D-17A0A075B6S4 117 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 IGHV1OR15-1A0A075B7D0 117 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 ZSCAN5BA6NJL1 495 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 A8MUA0 341 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 TM9SF1O15321 606 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 PPIHO43447 177 aaKnown RBP1.14□□□□□ -2.23
PDGFC-208ENST00000512711 EFNA2O43921 213 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 SYNGR4O95473 234 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms