RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 VPS29Q9UBQ0 182 aa6.53□□□□□ -1.36
USP46-208ENST00000512656 ZNF639Q9UID6 485 aa6.53□□□□□ -1.36
USP46-208ENST00000512656 CES1P1Q9UKY3 287 aa6.53□□□□□ -1.36
USP46-208ENST00000512656 CBLCQ9ULV8 474 aa6.53□□□□□ -1.36
USP46-208ENST00000512656 EXO1Q9UQ84 846 aaKnown RBP6.53□□□□□ -1.36
USP46-208ENST00000512656 TLN2Q9Y4G6 2542 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 ARHGAP21Q5T5U3 1957 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 FRG2CA6NGY1 282 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 OR6C70A6NIJ9 312 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 SLC22A31A6NKX4 558 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 CLCA1A8K7I4 914 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 CASKO14936 926 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 DNAJA2O60884 412 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 ULK1O75385 1050 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 RCBTB2O95199 551 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 PDYNP01213 254 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 RPS17P08708 135 aaKnown RBP6.52□□□□□ -1.37
USP46-208ENST00000512656 SNRPAP09012 282 aaKnown RBP6.52□□□□□ -1.37
USP46-208ENST00000512656 HMOX2P30519 316 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 SRD5A2P31213 254 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 MPIP34949 423 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 KIR2DL2P43627 348 aaPredicted RBP6.52□□□□□ -1.37
USP46-208ENST00000512656 GSTM5P46439 218 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 WNT3P56703 355 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 MGAT2Q10469 447 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 GALNT1Q10472 559 aaPredicted RBP6.52□□□□□ -1.37
USP46-208ENST00000512656 CSTF3Q12996 717 aaKnown RBP6.52□□□□□ -1.37
USP46-208ENST00000512656 EXOSC7Q15024 291 aaKnown RBP6.52□□□□□ -1.37
USP46-208ENST00000512656 RASA2Q15283 850 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 TRMT12Q53H54 448 aaKnown RBP6.52□□□□□ -1.37
USP46-208ENST00000512656 CHMP1BQ7LBR1 199 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 IFNEQ86WN2 208 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 PLCZ1Q86YW0 608 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 CNPY4Q8N129 248 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 C1orf52Q8N6N3 182 aaKnown RBP6.52□□□□□ -1.37
USP46-208ENST00000512656 C9orf106Q8NAJ2 232 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 OR52R1Q8NGF1 315 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 LINC01560Q8TB33 94 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 ZNF675Q8TD23 568 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 ZNF483Q8TF39 744 aaPredicted RBP6.52□□□□□ -1.37
USP46-208ENST00000512656 CTHRC1Q96CG8 243 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 SLC35A4Q96G79 324 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 DACH2Q96NX9 599 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 BTBD9Q96Q07 612 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 NODALQ96S42 347 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 FMO2Q99518 471 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 TUBA1CQ9BQE3 449 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 G6PC3Q9BUM1 346 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 RBM24Q9BX46 236 aaKnown RBP6.52□□□□□ -1.37
USP46-208ENST00000512656 C1QTNF3Q9BXJ4 246 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 LIME1Q9H400 295 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 TAS2R10Q9NYW0 307 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 JKAMPQ9P055 326 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 SENP1Q9P0U3 644 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 NDRG3Q9UGV2 375 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 TRPS1Q9UHF7 1281 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 MCM8Q9UJA3 840 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 ZNF180Q9UJW8 692 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 DKKL1Q9UK85 242 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 UTS2RQ9UKP6 389 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 MAPRE3Q9UPY8 281 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 DTX4Q9Y2E6 619 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 STK38LQ9Y2H1 464 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 GPR55Q9Y2T6 319 aaPredicted RBP6.52□□□□□ -1.37
USP46-208ENST00000512656 PLLPQ9Y342 182 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 MRPS18CQ9Y3D5 142 aaKnown RBP6.52□□□□□ -1.37
USP46-208ENST00000512656 MPDZO75970 2070 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 FREM3P0C091 2139 aa6.52□□□□□ -1.37
USP46-208ENST00000512656 A0A087WUV0 522 aaPredicted RBP6.51□□□□□ -1.37
USP46-208ENST00000512656 GNG14A0A1W2PPG7 69 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 A8MT66 165 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 KDM4EB2RXH2 506 aaPredicted RBP6.51□□□□□ -1.37
USP46-208ENST00000512656 TRIM49D1C9J1S8 452 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 POC1B-GALNT4F8VUJ3 575 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 MANBAO00462 879 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 PCDH7O60245 1069 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 UGT2B11O75310 529 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 SUPT7LO94864 414 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 UBOX5O94941 541 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 CRHP06850 196 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 IL12BP29460 328 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 HSD17B3P37058 310 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 EMDP50402 254 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 AGFG1P52594 562 aaKnown RBP6.51□□□□□ -1.37
USP46-208ENST00000512656 CDH13P55290 713 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 EEFSECP57772 596 aaKnown RBP6.51□□□□□ -1.37
USP46-208ENST00000512656 HMGCS1Q01581 520 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 SRYQ05066 204 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 CLCQ05315 142 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 ACSM2AQ08AH3 577 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 FOXD4Q12950 439 aaPredicted RBP6.51□□□□□ -1.37
USP46-208ENST00000512656 HEPACAMQ14CZ8 416 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 BCL2A1Q16548 175 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 WHAMMP3Q1A5X7 153 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 DEFB113Q30KQ7 82 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 SPIN4Q56A73 249 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 TEX35Q5T0J7 233 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 DCST1Q5T197 706 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 ACSM2BQ68CK6 577 aa6.51□□□□□ -1.37
USP46-208ENST00000512656 OR2A2Q6IF42 318 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms