RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 IST1P53990 364 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 KRTAP12-2P59991 146 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 CNTN2Q02246 1040 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 CRMP1Q14194 572 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 SLX4IPQ5VYV7 408 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 TMEM184AQ6ZMB5 413 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 TMUB2Q71RG4 321 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 HIPK1Q86Z02 1210 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 UNC5CLQ8IV45 518 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 STKLD1Q8NE28 680 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 NANPQ8TBE9 248 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 M1APQ8TC57 530 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 TBCKQ8TEA7 893 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 OSTF1Q92882 214 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 C18orf25Q96B23 403 aaPredicted RBP2.43□□□□□ -2.02
CHD1-207ENST00000511628 VPS35Q96QK1 796 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 TM2D1Q9BX74 207 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 ZBP1Q9H171 429 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 SLC25A51Q9H1U9 297 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 WDR76Q9H967 626 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 MEAF6Q9HAF1 191 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 LPAR2Q9HBW0 351 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 AMBNQ9NP70 447 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 ABCD2Q9UBJ2 740 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 CIDEBQ9UHD4 219 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 ZNF107Q9UII5 783 aaPredicted RBP2.43□□□□□ -2.02
CHD1-207ENST00000511628 LAMP5Q9UJQ1 280 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 CELA1Q9UNI1 258 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 DUSP12Q9UNI6 340 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 DHRS7Q9Y394 339 aa2.43□□□□□ -2.02
CHD1-207ENST00000511628 PRRC2AP48634 2157 aaKnown RBP2.42□□□□□ -2.02
CHD1-207ENST00000511628 CCDC7Q96M83 1385 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 ZNF840PA6NDX5 716 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 FAM74A7A6NL05 159 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 E9PAM4 449 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 C11orf98E9PRG8 122 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 DUX1O43812 170 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 ZNF354AO60765 605 aaPredicted RBP2.42□□□□□ -2.02
CHD1-207ENST00000511628 TM7SF2O76062 418 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 PIGRP01833 764 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 PCCBP05166 539 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 PTMAP06454 111 aaKnown RBP2.42□□□□□ -2.02
CHD1-207ENST00000511628 ASNSP08243 561 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 IGFBP1P08833 259 aaPredicted RBP2.42□□□□□ -2.02
CHD1-207ENST00000511628 FAM200BP0CF97 657 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 EPB41P11171 864 aaKnown RBP2.42□□□□□ -2.02
CHD1-207ENST00000511628 UMPSP11172 480 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 ANXA3P12429 323 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 KLK2P20151 261 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 RPL4P36578 427 aaKnown RBP2.42□□□□□ -2.02
CHD1-207ENST00000511628 ELK3P41970 407 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 OR1D4P47884 311 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 HMGCS2P54868 508 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 ERVPABLB-1P60509 514 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 PLOD1Q02809 727 aaPredicted RBP2.42□□□□□ -2.02
CHD1-207ENST00000511628 SNTB2Q13425 540 aaKnown RBP2.42□□□□□ -2.02
CHD1-207ENST00000511628 CAMK4Q16566 473 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 DCAF4L1Q3SXM0 396 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 SLC22A6Q4U2R8 563 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 FAM74A3Q4VXF1 159 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 OLFML2AQ68BL7 652 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 NCR3LG1Q68D85 454 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 CES3Q6UWW8 571 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 LANCL3Q6ZV70 420 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 VPS36Q86VN1 386 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 PARGQ86W56 976 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 CENPLQ8N0S6 344 aaPredicted RBP2.42□□□□□ -2.02
CHD1-207ENST00000511628 OR5AU1Q8NGC0 362 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 TYMSOSQ8TAI1 123 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 RBM18Q96H35 190 aaKnown RBP2.42□□□□□ -2.02
CHD1-207ENST00000511628 ZNF414Q96IQ9 312 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 CNOT6LQ96LI5 555 aaKnown RBP2.42□□□□□ -2.02
CHD1-207ENST00000511628 GSDMCQ9BYG8 508 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 RAB33BQ9H082 229 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 DHX33Q9H6R0 707 aaKnown RBP2.42□□□□□ -2.02
CHD1-207ENST00000511628 CLEC5AQ9NY25 188 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 RAI14Q9P0K7 980 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 AP4B1Q9Y6B7 739 aa2.42□□□□□ -2.02
CHD1-207ENST00000511628 A0A1W2PQ72 361 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 FRG2CA6NGY1 282 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 NDC80O14777 642 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 HAT1O14929 419 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 XPO1O14980 1071 aaKnown RBP2.41□□□□□ -2.02
CHD1-207ENST00000511628 MAPK13O15264 365 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 PPIHO43447 177 aaKnown RBP2.41□□□□□ -2.02
CHD1-207ENST00000511628 JAK2O60674 1132 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 SRPX2O60687 465 aaPredicted RBP2.41□□□□□ -2.02
CHD1-207ENST00000511628 NOL3O60936 208 aaKnown RBP2.41□□□□□ -2.02
CHD1-207ENST00000511628 KBTBD11O94819 623 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 UFL1O94874 794 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 PRAMEF12O95522 483 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 CLUP10909 449 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 LAMP1P11279 417 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 UQCRBP14927 111 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 TNNI3P19429 210 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 PTBP1P26599 531 aaKnown RBP eCLIP2.41□□□□□ -2.02
CHD1-207ENST00000511628 CA8P35219 290 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 SOX6P35712 828 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 RPL34P49207 117 aaKnown RBP2.41□□□□□ -2.02
CHD1-207ENST00000511628 ACADVLP49748 655 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms