RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 KRT34O76011 436 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 IGLV1-44P01699 117 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 VIMP08670 466 aaKnown RBP3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 ALPIP09923 528 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 ATP5DP30049 168 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 TLX1P31314 330 aaPredicted RBP3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 TIA1P31483 386 aaKnown RBP eCLIP3.05□□□□□ -1.921e-6■■■■□ 21.9
TOPBP1-208ENST00000511439 PRKCIP41743 596 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 NAMPTP43490 491 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 ST8SIA6P61647 398 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 NOP14P78316 857 aaKnown RBP3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 SCN1BQ07699 218 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 TRAP1Q12931 704 aaKnown RBP3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 C1orf61Q13536 156 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 RAPSNQ13702 412 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 ELOCQ15369 112 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 TAZQ16635 292 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 LRRC73Q5JTD7 316 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 TMEM215Q68D42 235 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 SHQ1Q6PI26 577 aaKnown RBP3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 MSANTD1Q6ZTZ1 278 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 C4orf19Q8IY42 314 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 CNPY4Q8N129 248 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 DNAAF3Q8N9W5 541 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 TMEM178AQ8NBL3 297 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 OR4D9Q8NGE8 314 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 HEXDCQ8WVB3 486 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 GMPPAQ96IJ6 420 aaPredicted RBP3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 CTRCQ99895 268 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 ASCL2Q99929 193 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 GPATCH1Q9BRR8 931 aaKnown RBP3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 LXNQ9BS40 222 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 LRRC61Q9BV99 259 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 ULBP3Q9BZM4 244 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 EGLN1Q9GZT9 426 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 THAP2Q9H0W7 228 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 SNX25Q9H3E2 840 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 FN3KRPQ9HA64 309 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 C6orf50Q9HD87 102 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 IL17CQ9P0M4 197 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 TMEM181Q9P2C4 612 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 MAN1B1Q9UKM7 699 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 KCNK7Q9Y2U2 307 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 POMT1Q9Y6A1 747 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 TDRD6O60522 2096 aaKnown RBP3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 TRIP11Q15643 1979 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 SMCO2A6NFE2 343 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 TRIM64A6NGJ6 449 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 TRIM64BA6NI03 449 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 CYB561D2O14569 222 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 IFIT3O14879 490 aaKnown RBP3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 EPHB6O15197 1021 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 TLX2O43763 284 aaPredicted RBP3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 NUDT21O43809 227 aaKnown RBP3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 HMMRO75330 724 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 PLEKHA8P1O95397 391 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 IL1BP01584 269 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 SERPING1P05155 500 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 PTMAP06454 111 aaKnown RBP3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 SPP1P10451 314 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 THRAP10827 490 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 MCF2P10911 925 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 KRT5P13647 590 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 ALDH4A1P30038 563 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 CDX1P47902 265 aaPredicted RBP3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 LIMK2P53671 638 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 CACNG1Q06432 222 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 CDO1Q16878 200 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 HNRNPA1L2Q32P51 320 aaKnown RBP3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 GPR33Q49SQ1 333 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 LBHQ53QV2 105 aaPredicted RBP3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 ODF2Q5BJF6 829 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 ADAMTSL4-AS1Q5T5F5 129 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 LCN1P1Q5VSP4 162 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 LIPNQ5VXI9 398 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 WSCD1Q658N2 575 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 TXNRD3NBQ6F5E7 133 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 SLC25A47Q6Q0C1 308 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 TMEM182Q6ZP80 229 aaPredicted RBP3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 SYVN1Q86TM6 617 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 AMIGO1Q86WK6 493 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 CDC20BQ86Y33 519 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 LACC1Q8IV20 430 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 APCDD1Q8J025 514 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 SIX6OS1Q8N1H7 587 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 C3orf56Q8N813 242 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 ZNF713Q8N859 430 aaPredicted RBP3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 NIPA2Q8N8Q9 360 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 ZNF485Q8NCK3 441 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 ADAD2Q8NCV1 583 aaKnown RBP3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 OR5AP2Q8NGF4 316 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 MRGPRDQ8TDS7 321 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 CORO2AQ92828 525 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 MR1Q95460 341 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 ST6GALNAC6Q969X2 333 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 AZIN2Q96A70 460 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 FAM131CQ96AQ9 280 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 PGM2Q96G03 612 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 C4orf45Q96LM5 186 aa3.04□□□□□ -1.92
TOPBP1-208ENST00000511439 C10orf90Q96M02 699 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms