RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 PRIM2P49643 509 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 KHKP50053 298 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 SLC7A2P52569 658 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 MRPS22P82650 360 aaKnown RBP4.97□□□□□ -1.61
PROM1-211ENST00000511153 PSG6Q00889 435 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 FUT5Q11128 374 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 TUBA3CQ13748 450 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 OR1C1Q15619 314 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 ZNHIT3Q15649 155 aaPredicted RBP4.97□□□□□ -1.61
PROM1-211ENST00000511153 MEP1AQ16819 746 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 CYP51A1Q16850 503 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 DPY19L1Q2PZI1 675 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 GRAMD1BQ3KR37 738 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 PIGGQ5H8A4 983 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 SAXO2Q658L1 398 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 TUBA3EQ6PEY2 450 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 PCSK4Q6UW60 755 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 LINC00114Q6XXX2 140 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 TRPM8Q7Z2W7 1104 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 C16orf62Q7Z3J2 963 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 GALNTL5Q7Z4T8 443 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 ZNF227Q86WZ6 799 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 CYP4Z2PQ8N1L4 340 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 OR7G1Q8NGA0 311 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 OR5L2Q8NGL0 311 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 OR10Q1Q8NGQ4 319 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 NFKBIDQ8NI38 313 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 TTC9Q92623 222 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 ZG16BQ96DA0 208 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 DNAJA3Q96EY1 480 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 SH3YL1Q96HL8 342 aaPredicted RBP4.97□□□□□ -1.61
PROM1-211ENST00000511153 NSL1Q96IY1 281 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 VPS50Q96JG6 964 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 LCORQ96JN0 433 aaPredicted RBP4.97□□□□□ -1.61
PROM1-211ENST00000511153 CLPTM1LQ96KA5 538 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 ART5Q96L15 291 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 ZNF354BQ96LW1 612 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 IP6K3Q96PC2 410 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 KLHDC3Q9BQ90 382 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 UTP23Q9BRU9 249 aaKnown RBP4.97□□□□□ -1.61
PROM1-211ENST00000511153 ACTRT3Q9BYD9 372 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 EPS8L2Q9H6S3 715 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 SRA1Q9HD15 236 aaKnown RBP4.97□□□□□ -1.61
PROM1-211ENST00000511153 Q9N2J8 555 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 HPF1Q9NWY4 346 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 CMTM6Q9NX76 183 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 TAGLN3Q9UI15 199 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 CBLCQ9ULV8 474 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 GPR55Q9Y2T6 319 aaPredicted RBP4.97□□□□□ -1.61
PROM1-211ENST00000511153 NPFFR2Q9Y5X5 522 aa4.97□□□□□ -1.61
PROM1-211ENST00000511153 ZFYVE26Q68DK2 2539 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 A0A087WV62 115 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 A0A096LPE4 126 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 TMEM238LA0A1B0GVL6 79 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 A0A1W2PPZ6 126 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 DYTNA2CJ06 578 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 ERICH4A6NGS2 130 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 FRG2CA6NGY1 282 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 FAM229AH3BQW9 127 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 LINC01387J3KSC0 135 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 HMGN4O00479 90 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 TPD52L2O43399 206 aaKnown RBP4.96□□□□□ -1.62
PROM1-211ENST00000511153 CDC40O60508 579 aaKnown RBP eCLIP4.96□□□□□ -1.62
PROM1-211ENST00000511153 BCAS1O75363 584 aaPredicted RBP4.96□□□□□ -1.62
PROM1-211ENST00000511153 SMNDC1O75940 238 aaKnown RBP eCLIP4.96□□□□□ -1.62
PROM1-211ENST00000511153 PDE9AO76083 593 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 KCNK2O95069 426 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 H6PDO95479 791 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 OPN1SWP03999 348 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 T-ENOLP0DO92 83 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 ICAM2P13598 275 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 NID1P14543 1247 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 HOXB9P17482 250 aaPredicted RBP4.96□□□□□ -1.62
PROM1-211ENST00000511153 DDX5P17844 614 aaKnown RBP4.96□□□□□ -1.62
PROM1-211ENST00000511153 PTNP21246 168 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 KRT20P35900 424 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 TRPC1P48995 793 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 MAN2A2P49641 1150 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 MVDP53602 400 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 DSTNP60981 165 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 PSME3P61289 254 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 POU6F2P78424 691 aaPredicted RBP4.96□□□□□ -1.62
PROM1-211ENST00000511153 HOXC5Q00444 222 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 CHRNEQ04844 493 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 MFAP5Q13361 173 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 MLC1Q15049 377 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 TOMM20Q15388 145 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 RGNQ15493 299 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 MAPRE2Q15555 327 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 TRMT5Q32P41 509 aaKnown RBP4.96□□□□□ -1.62
PROM1-211ENST00000511153 PLEKHN1Q494U1 663 aaPredicted RBP4.96□□□□□ -1.62
PROM1-211ENST00000511153 LACTB2Q53H82 288 aaPredicted RBP4.96□□□□□ -1.62
PROM1-211ENST00000511153 RUNDC3AQ59EK9 446 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 CRB2Q5IJ48 1285 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 DCST2Q5T1A1 773 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 NANOGP8Q6NSW7 305 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 MTERF4Q7Z6M4 381 aaKnown RBP4.96□□□□□ -1.62
PROM1-211ENST00000511153 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.96□□□□□ -1.62
PROM1-211ENST00000511153 MARCH3Q86UD3 253 aa4.96□□□□□ -1.62
PROM1-211ENST00000511153 APLFQ8IW19 511 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms