RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 PCDH15Q96QU1 1955 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 CEP192Q8TEP8 1941 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 LOC100289279A0A1B0GTE1 492 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 NPEPPSL1A6NEC2 478 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 ELOA3DA6NLF2 546 aaPredicted RBP2.61□□□□□ -1.99
CLOCK-209ENST00000511124 B9A039 149 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 AP3D1O14617 1153 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 HS3ST1O14792 307 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 ANGPTL1O95841 491 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 OCM2P0CE71 109 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 OCMP0CE72 109 aaPredicted RBP2.61□□□□□ -1.99
CLOCK-209ENST00000511124 FAM157CP0CG43 387 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 NQO1P15559 274 aaKnown RBP2.61□□□□□ -1.99
CLOCK-209ENST00000511124 HOXB6P17509 224 aaKnown RBP2.61□□□□□ -1.99
CLOCK-209ENST00000511124 USF1P22415 310 aaPredicted RBP2.61□□□□□ -1.99
CLOCK-209ENST00000511124 F8A1P23610 371 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 NMBRP28336 390 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 ECHS1P30084 290 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 GSTT1P30711 240 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 THBS2P35442 1172 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 APOBEC1P41238 236 aaKnown RBP2.61□□□□□ -1.99
CLOCK-209ENST00000511124 MAGEA4P43358 317 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 GPR6P46095 362 aaPredicted RBP2.61□□□□□ -1.99
CLOCK-209ENST00000511124 PLTPP55058 493 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 ADORA2A-AS1P86434 159 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 MAT1AQ00266 395 aaKnown RBP2.61□□□□□ -1.99
CLOCK-209ENST00000511124 ZNF763Q0D2J5 394 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 STX5Q13190 355 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 NPTX1Q15818 432 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 TIGD6Q17RP2 521 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 SWI5Q1ZZU3 235 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 ELOA3BQ3SY89 546 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 ZNF362Q5T0B9 420 aaPredicted RBP2.61□□□□□ -1.99
CLOCK-209ENST00000511124 FCRLBQ6BAA4 426 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 SPINK14Q6IE38 97 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 SYT10Q6XYQ8 523 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 ZNF704Q6ZNC4 412 aaPredicted RBP2.61□□□□□ -1.99
CLOCK-209ENST00000511124 RFLNAQ6ZTI6 216 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 ZNF547Q8IVP9 402 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 ZNF321PQ8N8H1 164 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 PTGR2Q8N8N7 351 aaPredicted RBP2.61□□□□□ -1.99
CLOCK-209ENST00000511124 MDS2Q8NDY4 140 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 ELOA3Q8NG57 546 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 OR51F2Q8NH61 342 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 VANGL1Q8TAA9 524 aaPredicted RBP2.61□□□□□ -1.99
CLOCK-209ENST00000511124 SFXN5Q8TD22 340 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 ITFG2Q969R8 447 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 DNAJA3Q96EY1 480 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 ZC3HAV1LQ96H79 300 aaKnown RBP2.61□□□□□ -1.99
CLOCK-209ENST00000511124 SLC35G5Q96KT7 338 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 RILPQ96NA2 401 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 FRMD6Q96NE9 622 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 MS4A4EQ96PG1 132 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 RBP7Q96R05 134 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 WACQ9BTA9 647 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 ANGPTL4Q9BY76 406 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 PRRG3Q9BZD7 231 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 WWTR1Q9GZV5 400 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 FAM234AQ9H0X4 552 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 C12orf49Q9H741 205 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 CBLN4Q9NTU7 201 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 TMPRSS11EQ9UL52 423 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 CBLCQ9ULV8 474 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 PPIEQ9UNP9 301 aaKnown RBP2.61□□□□□ -1.99
CLOCK-209ENST00000511124 EXO1Q9UQ84 846 aaKnown RBP2.61□□□□□ -1.99
CLOCK-209ENST00000511124 AURKCQ9UQB9 309 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 ANGPT4Q9Y264 503 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 ZNF835Q9Y2P0 537 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 PPP2R2CQ9Y2T4 447 aa2.61□□□□□ -1.99
CLOCK-209ENST00000511124 DENND4CQ5VZ89 1909 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 A0A087WV62 115 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 TRAV20A0A0B4J274 112 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 PYCARD-AS1I3L0S3 204 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 J3QLI3 93 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 SEMA7AO75326 666 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 F10P00742 488 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 TGFB1P01137 390 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 PGRP06401 933 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 PRPS1L1P21108 318 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 RAD52P43351 418 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 SLC6A12P48065 614 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 DNASE1L1P49184 302 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 CASP9P55211 416 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 GP2P55259 537 aaKnown RBP2.6□□□□□ -1.99
CLOCK-209ENST00000511124 BPIFB3P59826 476 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 MERTKQ12866 999 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 DUSP8Q13202 625 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 NTRK2Q16620 822 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 PFKFB4Q16877 469 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 ZNF750Q32MQ0 723 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 ACSF3Q4G176 576 aaPredicted RBP2.6□□□□□ -1.99
CLOCK-209ENST00000511124 GLIPR1L2Q4G1C9 344 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 GPAT3Q53EU6 434 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 PRAMEF20Q5VT98 475 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 NXNQ6DKJ4 435 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 C3orf33Q6P1S2 294 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 CASP12Q6UXS9 341 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 AAED1Q7RTV5 226 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 OR4N5Q8IXE1 308 aa2.6□□□□□ -1.99
CLOCK-209ENST00000511124 MUC20Q8N307 709 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms