RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ATE1O95260 518 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 UTS2O95399 124 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 IL33O95760 270 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 SHBGP04278 402 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 CRHP06850 196 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 CRHR1P34998 444 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 PRKAG1P54619 331 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 SIRPAP78324 504 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 FOXD4Q12950 439 aaPredicted RBP13.9□□□□□ -0.18
TPM3-219ENST00000509409 HSPB3Q12988 150 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 GANABQ14697 944 aaKnown RBP13.9□□□□□ -0.18
TPM3-219ENST00000509409 DEFB113Q30KQ7 82 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 CLEC6AQ6EIG7 209 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 IKBIPQ70UQ0 350 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 ZNF551Q7Z340 670 aaPredicted RBP13.9□□□□□ -0.18
TPM3-219ENST00000509409 SMPDL3BQ92485 455 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 PGM2Q96G03 612 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 EGLN2Q96KS0 407 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 PIGQQ9BRB3 760 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 IQCGQ9H095 443 aaKnown RBP13.9□□□□□ -0.18
TPM3-219ENST00000509409 PLEKHF2Q9H8W4 249 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 LRTM1Q9HBL6 345 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 OXSMQ9NWU1 459 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 FAM120CQ9NX05 1096 aaKnown RBP13.9□□□□□ -0.18
TPM3-219ENST00000509409 MTORP42345 2549 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 ABCA4P78363 2273 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 GXYLT2A0PJZ3 443 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 TTC36A6NLP5 189 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 B4DXG7 233 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 H0YC42 278 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 LINC01387J3KSC0 135 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 PDPK1O15530 556 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 AKAP10O43572 662 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 HCRTR2O43614 444 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 TNFRSF21O75509 655 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 TNFSF13O75888 250 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 HRGP04196 525 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 PRPS2P11908 318 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 KCNJ5P48544 419 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 SUCLG1P53597 346 aaKnown RBP13.89□□□□□ -0.19
TPM3-219ENST00000509409 TPD52P55327 224 aaPredicted RBP13.89□□□□□ -0.19
TPM3-219ENST00000509409 FAM27E3Q08E93 113 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 C17orf67Q0P5P2 114 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 LIPMQ5VYY2 423 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 ANKRD26P1Q6NSI1 321 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 PPP4R4Q6NUP7 873 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 VWA1Q6PCB0 445 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 SH2D5Q6ZV89 423 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 SZRD1Q7Z422 152 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 CEP70Q8NHQ1 597 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 GPR151Q8TDV0 419 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 FIG4Q92562 907 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 PIK3R3Q92569 461 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 STARD4Q96DR4 205 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 LMF2Q9BU23 707 aaKnown RBP13.89□□□□□ -0.19
TPM3-219ENST00000509409 PINK1Q9BXM7 581 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 NEUROD4Q9HD90 331 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 TNFRSF12AQ9NP84 129 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 C1orf109Q9NX04 203 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 SH3BP4Q9P0V3 963 aa13.89□□□□□ -0.19
TPM3-219ENST00000509409 MAP1AP78559 2803 aaPredicted RBP13.88□□□□□ -0.19
TPM3-219ENST00000509409 UQCRHLA0A096LP55 91 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 OR2M5A3KFT3 312 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 AZIN1O14977 448 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 ANGPTL1O95841 491 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 CHEK2O96017 543 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 KRT4P19013 534 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 MANFP55145 182 aaKnown RBP13.88□□□□□ -0.19
TPM3-219ENST00000509409 RPS3AP61247 264 aaKnown RBP13.88□□□□□ -0.19
TPM3-219ENST00000509409 ADAM8P78325 824 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 SGCBQ16585 318 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 GLYR1Q49A26 553 aaPredicted RBP13.88□□□□□ -0.19
TPM3-219ENST00000509409 VPS26BQ4G0F5 336 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 BTLAQ7Z6A9 289 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 C10orf107Q8IVU9 208 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 C4orf33Q8N1A6 199 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 NUP43Q8NFH3 380 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 ZFP28Q8NHY6 868 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 SLC9A6Q92581 669 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 CIDECQ96AQ7 238 aaPredicted RBP13.88□□□□□ -0.19
TPM3-219ENST00000509409 PPCDCQ96CD2 204 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 C1GALT1C1Q96EU7 318 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 ZNF845Q96IR2 970 aaPredicted RBP13.88□□□□□ -0.19
TPM3-219ENST00000509409 METTL2AQ96IZ6 378 aaKnown RBP13.88□□□□□ -0.19
TPM3-219ENST00000509409 SLC39A3Q9BRY0 314 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 PRRG4Q9BZD6 226 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 RTN4RQ9BZR6 473 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 OPN3Q9H1Y3 402 aaPredicted RBP13.88□□□□□ -0.19
TPM3-219ENST00000509409 STOML1Q9UBI4 398 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 MID2Q9UJV3 735 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 PTGDR2Q9Y5Y4 395 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 EXPH5Q8NEV8 1989 aa13.88□□□□□ -0.19
TPM3-219ENST00000509409 DOCK7Q96N67 2140 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 TLDC2A0PJX2 215 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 PSMG1O95456 288 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 LINC00032P0C843 101 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 POU2F1P14859 743 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 CD79BP40259 229 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 KIR2DL2P43627 348 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms