RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 I3L1I5 382 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF432O94892 652 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 APOC1P02654 83 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ESR1P03372 595 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 HCKP08631 526 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 GNLYP22749 145 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 GADD45AP24522 165 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PTX3P26022 381 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PTGS2P35354 604 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 APLNRP35414 380 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 HOXD13P35453 343 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 POLR2HP52434 150 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 GNB2P62879 340 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 RPL11P62913 178 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 MC2RQ01718 297 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 MEF2AQ02078 507 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 SEMA3BQ13214 749 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 TRMT5Q32P41 509 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 KCTD11Q693B1 232 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 XKR5Q6UX68 686 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PTCHD4Q6ZW05 846 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PLCZ1Q86YW0 608 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 TIGD4Q8IY51 512 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PRR22Q8IZ63 422 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF676Q8N7Q3 588 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 TCEANCQ8N8B7 351 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 OR5K2Q8NHB8 316 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 BAHD1Q8TBE0 780 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PIH1D2Q8WWB5 315 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ADAMTS14Q8WXS8 1223 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 LRRC58Q96CX6 371 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 FCRL4Q96PJ5 515 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 FCRL5Q96RD9 977 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ATP6V0BQ99437 205 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 TINAGL1Q9GZM7 467 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ESRP2Q9H6T0 727 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 FOXJ2Q9P0K8 574 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 MARCH4Q9P2E8 410 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 RSL24D1Q9UHA3 163 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 WIF1Q9Y5W5 379 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 SH3PXD2BA1X283 911 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 SMCO3A2RU48 225 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 VNN2O95498 520 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 RAB36O95755 333 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 CHN1P15882 459 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PI4KAP42356 2102 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ACAA2P42765 397 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 RAB8AP61006 207 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 TBPL1P62380 186 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 KCNC3Q14003 757 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 RBM39Q14498 530 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 MOGQ16653 247 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 CRB2Q5IJ48 1285 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 C6orf141Q5SZD1 244 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 UBAP2Q5T6F2 1119 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 STEAP3Q658P3 488 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PLEKHA7Q6IQ23 1121 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 TMEM53Q6P2H8 277 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 FAM199XQ6PEV8 388 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 KCTD18Q6PI47 426 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 C3P1Q6ZMU1 363 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 CDH24Q86UP0 819 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ABCA7Q8IZY2 2146 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 NATD1Q8N6N6 113 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PLD5Q8N7P1 536 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF709Q8N972 641 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PROKR2Q8NFJ6 384 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 CCL4L1Q8NHW4 92 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 SAP25Q8TEE9 199 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PATE1Q8WXA2 126 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 SCRN2Q96FV2 425 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 IL17FQ96PD4 163 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 VRK1Q99986 396 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 RNF32Q9H0A6 362 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 OR10A4Q9H209 315 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 CHST11Q9NPF2 352 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 TBC1D29Q9UFV1 150 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 LAMP5Q9UJQ1 280 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 TMEM5Q9Y2B1 443 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 DHRS7Q9Y394 339 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ARHGEF17Q96PE2 2063 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 CACNA1HO95180 2353 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 LOC105369274A0A096LPK9 316 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 LGALS8O00214 317 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 AZIN1O14977 448 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 FRS3O43559 492 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 RNF13O43567 381 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 DENRO43583 198 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 KIAA0513O60268 411 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 RDH16O75452 317 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 TNFRSF21O75509 655 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 IL2RAP01589 272 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PGRP06401 933 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ANXA2P07355 339 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ACVR2AP27037 513 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 CAPGP40121 348 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 GABRA4P48169 554 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 RNF144AP50876 292 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 CRISP3P54108 245 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 SCAND1P57086 179 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms