RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 TANKQ92844 425 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 EXT2Q93063 718 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 NCLNQ969V3 563 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 MRRFQ96E11 262 aaKnown RBP7.43□□□□□ -1.22
SCN1A-207ENST00000507401 CENPNQ96H22 339 aaPredicted RBP7.43□□□□□ -1.22
SCN1A-207ENST00000507401 RBM18Q96H35 190 aaKnown RBP7.43□□□□□ -1.22
SCN1A-207ENST00000507401 FRMD6Q96NE9 622 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 ALPK1Q96QP1 1244 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 HOPXQ9BPY8 73 aaPredicted RBP7.43□□□□□ -1.22
SCN1A-207ENST00000507401 ADI1Q9BV57 179 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 ZNF385DQ9H6B1 395 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 COQ10BQ9H8M1 238 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 IPPKQ9H8X2 491 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 ACTR8Q9H981 624 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 ZBTB26Q9HCK0 441 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 SPAG4Q9NPE6 437 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 KLHL1Q9NR64 748 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 TMEM45AQ9NWC5 275 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 IL20Q9NYY1 176 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 MYOTQ9UBF9 498 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 PHF11Q9UIL8 331 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 ZNF223Q9UK11 482 aaPredicted RBP7.43□□□□□ -1.22
SCN1A-207ENST00000507401 FBXW2Q9UKT8 454 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 KLF13Q9Y2Y9 288 aaPredicted RBP7.43□□□□□ -1.22
SCN1A-207ENST00000507401 TESMINQ9Y4I5 508 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 MYO7BQ6PIF6 2116 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 TRGV8A0A0C4DH27 118 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 ANKRD34BA5PLL1 514 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 TMEM200CA6NKL6 621 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 STX16-NPEPL1H3BU86 382 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 RTCAO00442 366 aaKnown RBP7.42□□□□□ -1.22
SCN1A-207ENST00000507401 CCL21O00585 134 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 STX16O14662 325 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 PROM1O43490 865 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 DYRK3O43781 588 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 SCO2O43819 266 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 SLC19A2O60779 497 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 ZG16O60844 167 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 ATE1O95260 518 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 CLDN9O95484 217 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 CHEK2O96017 543 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 HPRP00739 348 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 IFNA16P05015 189 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 TRAPPC2P0DI81 140 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 TRAPPC2BP0DI82 140 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 PCNAP12004 261 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 NAT1P18440 290 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 AGAP20933 346 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 FUT4P22083 530 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 CPN2P22792 545 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 FASP25445 335 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 PSMA4P25789 261 aaKnown RBP7.42□□□□□ -1.22
SCN1A-207ENST00000507401 PPP2R1BP30154 601 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 CAPGP40121 348 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 SSR2P43308 183 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 RPL14P50914 215 aaKnown RBP7.42□□□□□ -1.22
SCN1A-207ENST00000507401 SSR4P51571 173 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 PHC1P78364 1004 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 IRF9Q00978 393 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 PMP22Q01453 160 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 ITGADQ13349 1161 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 GTF2H2Q13888 395 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 PCLAFQ15004 111 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 DGUOKQ16854 277 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 ZNF362Q5T0B9 420 aaPredicted RBP7.42□□□□□ -1.22
SCN1A-207ENST00000507401 SP5Q6BEB4 398 aaPredicted RBP7.42□□□□□ -1.22
SCN1A-207ENST00000507401 GTF2H2CQ6P1K8 395 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 XKRXQ6PP77 449 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 RPTNQ6XPR3 784 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 PRSS48Q7RTY5 328 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 IGFN1Q86VF2 1251 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 SNX32Q86XE0 403 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 ARMC8Q8IUR7 673 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 SULF2Q8IWU5 870 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 ZNF786Q8N393 782 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 DHRSXQ8N5I4 330 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 SPERTQ8NA61 448 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 ZFP62Q8NB50 900 aaPredicted RBP7.42□□□□□ -1.22
SCN1A-207ENST00000507401 HIPK4Q8NE63 616 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 TSPEARQ8WU66 669 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 PHF10Q8WUB8 498 aaKnown RBP7.42□□□□□ -1.22
SCN1A-207ENST00000507401 ANKRD9Q96BM1 317 aaPredicted RBP7.42□□□□□ -1.22
SCN1A-207ENST00000507401 SH3YL1Q96HL8 342 aaPredicted RBP7.42□□□□□ -1.22
SCN1A-207ENST00000507401 SGCZQ96LD1 299 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 CSF3RQ99062 836 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 SORT1Q99523 831 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 MAPKAP1Q9BPZ7 522 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 TRAF4Q9BUZ4 470 aaPredicted RBP7.42□□□□□ -1.22
SCN1A-207ENST00000507401 NTMT1Q9BV86 223 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 HES7Q9BYE0 225 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 OR51B5Q9H339 312 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 DDX31Q9H8H2 851 aaKnown RBP7.42□□□□□ -1.22
SCN1A-207ENST00000507401 C12orf10Q9HB07 376 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 DMRT3Q9NQL9 472 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 CCM2LQ9NUG4 571 aaPredicted RBP7.42□□□□□ -1.22
SCN1A-207ENST00000507401 MARCOQ9UEW3 520 aaPredicted RBP7.42□□□□□ -1.22
SCN1A-207ENST00000507401 ENTPD4Q9Y227 616 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 KLF2Q9Y5W3 355 aaPredicted RBP7.42□□□□□ -1.22
SCN1A-207ENST00000507401 GTF3C1Q12789 2109 aa7.42□□□□□ -1.22
SCN1A-207ENST00000507401 NOTCH2Q04721 2471 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms