RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 PGM2Q96G03 612 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 AMDHD1Q96NU7 426 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 FAM111AQ96PZ2 611 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 LMF2Q9BU23 707 aaKnown RBP10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 PINK1Q9BXM7 581 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 TXLNGYQ9BZA5 131 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 OPN3Q9H1Y3 402 aaPredicted RBP10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 PTGES2Q9H7Z7 377 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 NEUROD4Q9HD90 331 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 TNFRSF12AQ9NP84 129 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 BEX4Q9NWD9 120 aaPredicted RBP10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 FAM120CQ9NX05 1096 aaKnown RBP10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 KLHL28Q9NXS3 571 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 TAS2R7Q9NYW3 318 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 ZNF337Q9Y3M9 751 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 FLNAP21333 2647 aaKnown RBP10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 GXYLT2A0PJZ3 443 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 H3BQF6 201 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 SIAH2O43255 324 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 GMFGO60234 142 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 TNFRSF21O75509 655 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 RSL1D1O76021 490 aaKnown RBP10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 UTS2O95399 124 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 PROCP04070 461 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 HOXC12P31275 282 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 CCKARP32238 428 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 KIR2DL2P43627 348 aaPredicted RBP10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 CLK3P49761 638 aaKnown RBP10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 CLDN20P56880 219 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 EEFSECP57772 596 aaKnown RBP10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 HSPB3Q12988 150 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 PON3Q15166 354 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 NOXRED1Q6NXP6 359 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 ZNF474Q6S9Z5 364 aaPredicted RBP10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 ZNF551Q7Z340 670 aaPredicted RBP10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 CXorf67Q86X51 503 aaPredicted RBP10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 FAM76AQ8TAV0 307 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 FNDC9Q8TBE3 224 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 DUSP19Q8WTR2 217 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 C1GALT1C1Q96EU7 318 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 ZNF845Q96IR2 970 aaPredicted RBP10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 EGLN2Q96KS0 407 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 WFIKKN1Q96NZ8 548 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 RHOXF2Q9BQY4 288 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 EQTNQ9NQ60 294 aa10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 RRAGDQ9NQL2 400 aaPredicted RBP10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 MRTO4Q9UKD2 239 aaKnown RBP10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 WBP11Q9Y2W2 641 aaKnown RBP10.4□□□□□ -0.74
HMGCS1-204ENST00000507293 DEFB108AA8MXU0 73 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 SHISA8B8ZZ34 492 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 LINC01387J3KSC0 135 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 CTIFO43310 598 aaKnown RBP10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 EMC8O43402 210 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 PLIN3O60664 434 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 ANGPTL1O95841 491 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 IGKV1D-16P01601 117 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 POU2F1P14859 743 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 GABRA3P34903 492 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 PCYT1AP49585 367 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 PSMD4P55036 377 aaKnown RBP10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 NAA20P61599 178 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 NKX6-1P78426 367 aaPredicted RBP10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 GRAMD1BQ3KR37 738 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 CFAP157Q5JU67 520 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 ANKRD26P1Q6NSI1 321 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 ZNF550Q7Z398 422 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 CEP112Q8N8E3 955 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 PIK3R3Q92569 461 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 GFM2Q969S9 779 aaKnown RBP10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 CIDECQ96AQ7 238 aaPredicted RBP10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 PIK3IP1Q96FE7 263 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 C18orf12Q96KH6 178 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 SMR3AQ99954 134 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 PIGQQ9BRB3 760 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 MED18Q9BUE0 208 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 TBL1XR1Q9BZK7 514 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 C12orf65Q9H3J6 166 aaKnown RBP10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 RNF122Q9H9V4 155 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 C3orf14Q9HBI5 128 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 ELOVL5Q9NYP7 299 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 ZNF175Q9Y473 711 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 CCL27Q9Y4X3 112 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 PTGDR2Q9Y5Y4 395 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 AP4B1Q9Y6B7 739 aa10.39□□□□□ -0.75
HMGCS1-204ENST00000507293 DSCAMO60469 2012 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 IGLV3-32A0A0A0MS00 114 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 SLC28A1O00337 649 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 PDPK1O15530 556 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 SEC22BO75396 215 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 KCNH1O95259 989 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 CGAP01215 116 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 SHBGP04278 402 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 IFI6P09912 130 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 UROSP10746 265 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 PRPS2P11908 318 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 CPA3P15088 417 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 CRYGSP22914 178 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 PRPH2P23942 346 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 GPC1P35052 558 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 UGT2B10P36537 528 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms