RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 SHEQ5VZ18 495 aa16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 HIST2H2AA3Q6FI13 130 aa16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 BBS1Q8NFJ9 593 aa16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 OR4Q3Q8NH05 313 aa16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 SCAMP4Q969E2 229 aa16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 DDOQ99489 341 aa16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 FAIM2Q9BWQ8 316 aa16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 MS4A7Q9GZW8 240 aaPredicted RBP16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 SPRTNQ9H040 489 aaPredicted RBP16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 IFT46Q9NQC8 304 aa16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 CTPS2Q9NRF8 586 aa16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 P2RX2Q9UBL9 471 aa16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 NUP210Q8TEM1 1887 aaPredicted RBP16.02■□□□□ 0.15
SQSTM1-211ENST00000506690 SLC5A10A0PJK1 596 aa16.02■□□□□ 0.15
SQSTM1-211ENST00000506690 GSAPA4D1B5 854 aa16.02■□□□□ 0.15
SQSTM1-211ENST00000506690 SEPT4O43236 478 aa16.02■□□□□ 0.15
SQSTM1-211ENST00000506690 CH25HO95992 272 aa16.02■□□□□ 0.15
SQSTM1-211ENST00000506690 NMBP08949 121 aa16.02■□□□□ 0.15
SQSTM1-211ENST00000506690 SDHBP21912 280 aa16.02■□□□□ 0.15
SQSTM1-211ENST00000506690 SMAD3P84022 425 aaKnown RBP16.02■□□□□ 0.15
SQSTM1-211ENST00000506690 SLC22A10Q63ZE4 541 aa16.02■□□□□ 0.15
SQSTM1-211ENST00000506690 TPRA1Q86W33 373 aa16.02■□□□□ 0.15
SQSTM1-211ENST00000506690 SIRT6Q8N6T7 355 aa16.02■□□□□ 0.15
SQSTM1-211ENST00000506690 CXorf58Q96LI9 332 aa16.02■□□□□ 0.15
SQSTM1-211ENST00000506690 TIMP4Q99727 224 aa16.02■□□□□ 0.15
SQSTM1-211ENST00000506690 ABCG4Q9H172 646 aa16.02■□□□□ 0.15
SQSTM1-211ENST00000506690 DDX31Q9H8H2 851 aaKnown RBP16.02■□□□□ 0.15
SQSTM1-211ENST00000506690 BRD7Q9NPI1 651 aa16.02■□□□□ 0.15
SQSTM1-211ENST00000506690 BABAM2Q9NXR7 383 aa16.02■□□□□ 0.15
SQSTM1-211ENST00000506690 ENTPD4Q9Y227 616 aa16.02■□□□□ 0.15
SQSTM1-211ENST00000506690 DYRK1BQ9Y463 629 aa16.02■□□□□ 0.15
SQSTM1-211ENST00000506690 PLSCR5A0PG75 271 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 TMEM88BA6NKF7 163 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 ADAM12O43184 909 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 GREM1O60565 184 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 TBX19O60806 448 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 PEX14O75381 377 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 MT-ND4P03905 459 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 CXCL2P19875 107 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 F8A1P23610 371 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 PCBP4P57723 403 aaKnown RBP16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 HSPB3Q12988 150 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 KLF9Q13886 244 aaPredicted RBP16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 FAM27D1Q5T7N8 215 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 SLC30A6Q6NXT4 461 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 FAM198BQ6UWH4 519 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 METTL3Q86U44 580 aaKnown RBP16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 CPXM2Q8N436 756 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 AHCYL2Q96HN2 611 aaKnown RBP16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 LCORQ96JN0 433 aaPredicted RBP16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 C20orf85Q9H1P6 137 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 CD93Q9NPY3 652 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 MED17Q9NVC6 651 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 OR6C2Q9NZP2 312 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 CNIH4Q9P003 139 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 ING1Q9UK53 422 aaPredicted RBP16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 HRH3Q9Y5N1 445 aa16.01■□□□□ 0.15
SQSTM1-211ENST00000506690 H7C4K7 107 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 PI15O43692 258 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 RGS11O94810 467 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 TGM6O95932 706 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 ASGR1P07306 291 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 IFNGR2P38484 337 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 FRKP42685 505 aaPredicted RBP16■□□□□ 0.15
SQSTM1-211ENST00000506690 SNRPD1P62314 119 aaKnown RBP16■□□□□ 0.15
SQSTM1-211ENST00000506690 TLE2Q04725 743 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 SNTB2Q13425 540 aaKnown RBP16■□□□□ 0.15
SQSTM1-211ENST00000506690 DYRK1AQ13627 763 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 FAM26DQ5JW98 314 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 FUT10Q6P4F1 479 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 PRSS55Q6UWB4 352 aaPredicted RBP16■□□□□ 0.15
SQSTM1-211ENST00000506690 ZNF740Q8NDX6 193 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 PPP1R16AQ96I34 528 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 SGPP1Q9BX95 441 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 RPS6KB2Q9UBS0 482 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 TRABD2BA6NFA1 517 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 HYAL3O43820 417 aaPredicted RBP16■□□□□ 0.15
SQSTM1-211ENST00000506690 WNT1P04628 370 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 ATP6V1E1P36543 226 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 B2MP61769 119 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 PITPNAQ00169 270 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 MLLT1Q03111 559 aaPredicted RBP16■□□□□ 0.15
SQSTM1-211ENST00000506690 SLC25A35Q3KQZ1 300 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 RNASE12Q5GAN4 147 aaKnown RBP16■□□□□ 0.15
SQSTM1-211ENST00000506690 SLC9B2Q86UD5 537 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 OR51Q1Q8NH59 317 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 MOSPD2Q8NHP6 518 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 BEX1Q9HBH7 125 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 NPDC1Q9NQX5 325 aaPredicted RBP16■□□□□ 0.15
SQSTM1-211ENST00000506690 PRKAG2Q9UGJ0 569 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 CLEC4EQ9ULY5 219 aa16■□□□□ 0.15
SQSTM1-211ENST00000506690 OR6C65A6NJZ3 312 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 C1orf105O95561 183 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 GNSP15586 552 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 DRD5P21918 477 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 PDHA2P29803 388 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 OMPP47874 163 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 CTSCP53634 463 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 TSTA3Q13630 321 aaPredicted RBP15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 GRIN2CQ14957 1233 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms