RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 GIMAP2Q9UG22 337 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 ATP6V1HQ9UI12 483 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 ZDHHC2Q9UIJ5 367 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 RAB21Q9UL25 225 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 F8P00451 2351 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 CSMD2Q7Z408 3487 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 PCNX3Q9H6A9 2034 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 GXYLT2A0PJZ3 443 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 TMEM114B3SHH9 223 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 SCAMP2O15127 329 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 HCRTR2O43614 444 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 SCO2O43819 266 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 IL18BPO95998 194 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 IL2RAP01589 272 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 IGKV1D-16P01601 117 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 DHRS4L1P0CG22 281 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 ACP2P11117 423 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 BMP5P22003 454 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 CTSSP25774 331 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 MAPK1P28482 360 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 GABRA3P34903 492 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 GCKP35557 465 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 STARP49675 285 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 ASCL1P50553 236 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 PSMD4P55036 377 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 MANFP55145 182 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 DSCR4P56555 118 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 RCAN2Q14206 197 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 BCL2A1Q16548 175 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 KRT71Q3SY84 523 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 C6orf136Q5SQH8 315 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 OR5M10Q6IEU7 315 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 ENPP6Q6UWR7 440 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 ARSKQ6UWY0 536 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 LRIG3Q6UXM1 1119 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 R3HCC1LQ7Z5L2 792 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 CDRT4Q8N9R6 151 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 C9orf106Q8NAJ2 232 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 CEP70Q8NHQ1 597 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 PSMA8Q8TAA3 256 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 FAM110BQ8TC76 370 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 AGR3Q8TD06 166 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 RNASE6Q93091 150 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 ZFP3Q96NJ6 502 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 MS4A4EQ96PG1 132 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 TRIB1Q96RU8 372 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 USB1Q9BQ65 265 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 DSN1Q9H410 356 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 JKAMPQ9P055 326 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 SH3BP4Q9P0V3 963 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 PPP4R1LQ9P1A2 415 aa8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 MRTO4Q9UKD2 239 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-209ENST00000506632 MED12LQ86YW9 2145 aa8.21□□□□□ -1.09
PDLIM5-209ENST00000506632 FAM221AA4D161 298 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 CLCA1A8K7I4 914 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 ALG1L2C9J202 215 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 H0Y3Z8 333 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 CTIFO43310 598 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 EMC8O43402 210 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 ITM2AO43736 263 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 PEX11AO75192 247 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 LYPLA1O75608 230 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 RCBTB2O95199 551 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 KCNH1O95259 989 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 UTS2O95399 124 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 NGFRP08138 427 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 LAMP1P11279 417 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 GPC1P35052 558 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 HPCAL1P37235 193 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 PEX19P40855 299 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 CLDN15P56746 228 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 C21orf58P58505 322 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 PRR5P85299 388 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 GANABQ14697 944 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 PTGR1Q14914 329 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 TESK1Q15569 626 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 TMEM44Q2T9K0 475 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 GRAMD1BQ3KR37 738 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 VPS26BQ4G0F5 336 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 MFSD12Q6NUT3 480 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 AAGABQ6PD74 315 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 ZCCHC12Q6PEW1 402 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 APOOLQ6UXV4 268 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 MARCH3Q86UD3 253 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 EXOC3L1Q86VI1 746 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 NUDCD3Q8IVD9 361 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 RIMKLAQ8IXN7 391 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 SLC16A11Q8NCK7 471 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 NUP43Q8NFH3 380 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 OR7A2PQ8NGA2 310 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 OR4K17Q8NGC6 315 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 PIK3R3Q92569 461 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 WNT2BQ93097 391 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 FAM120BQ96EK7 910 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 C1GALT1C1Q96EU7 318 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 RMND5BQ96G75 393 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 PKNOX2Q96KN3 472 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 SFXN2Q96NB2 322 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 ZIM3Q96PE6 472 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms