RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 NEFHP12036 1026 aa15.15■□□□□ 0.02
PDLIM7-215ENST00000506161 CPN1P15169 458 aa15.15■□□□□ 0.02
PDLIM7-215ENST00000506161 CD1EP15812 388 aa15.15■□□□□ 0.02
PDLIM7-215ENST00000506161 GABRA3P34903 492 aa15.15■□□□□ 0.02
PDLIM7-215ENST00000506161 HSPB2Q16082 182 aa15.15■□□□□ 0.02
PDLIM7-215ENST00000506161 GRAMD1BQ3KR37 738 aa15.15■□□□□ 0.02
PDLIM7-215ENST00000506161 CYP27C1Q4G0S4 372 aa15.15■□□□□ 0.02
PDLIM7-215ENST00000506161 C6orf136Q5SQH8 315 aa15.15■□□□□ 0.02
PDLIM7-215ENST00000506161 IFNEQ86WN2 208 aa15.15■□□□□ 0.02
PDLIM7-215ENST00000506161 KRTCAP2Q8N6L1 136 aa15.15■□□□□ 0.02
PDLIM7-215ENST00000506161 SLC16A11Q8NCK7 471 aa15.15■□□□□ 0.02
PDLIM7-215ENST00000506161 NUP43Q8NFH3 380 aa15.15■□□□□ 0.02
PDLIM7-215ENST00000506161 RMND5BQ96G75 393 aaPredicted RBP15.15■□□□□ 0.02
PDLIM7-215ENST00000506161 YIPF4Q9BSR8 244 aa15.15■□□□□ 0.02
PDLIM7-215ENST00000506161 NTMQ9P121 344 aa15.15■□□□□ 0.02
PDLIM7-215ENST00000506161 CLCF1Q9UBD9 225 aa15.15■□□□□ 0.02
PDLIM7-215ENST00000506161 WBP11Q9Y2W2 641 aaKnown RBP15.15■□□□□ 0.02
PDLIM7-215ENST00000506161 HRNRQ86YZ3 2850 aaPredicted RBP15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 CLCA1A8K7I4 914 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 GMFGO60234 142 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 NKX2-2O95096 273 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 UTS2O95399 124 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 TGM6O95932 706 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 LAMP1P11279 417 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 ZNF708P17019 499 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 DPP4P27487 766 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 KRT20P35900 424 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 SUCLG1P53597 346 aaKnown RBP15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 PRKAG1P54619 331 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 MRPS22P82650 360 aaKnown RBP15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 DUSP5Q16690 384 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 KRT71Q3SY84 523 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 TNFAIP8L3Q5GJ75 292 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 PM20D2Q8IYS1 436 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 ZPLD1Q8TCW7 415 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 LIME1Q9H400 295 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 CRIM1Q9NZV1 1036 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 ATP6V1HQ9UI12 483 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 NAV3Q8IVL0 2385 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 HEATR5AQ86XA9 2040 aa15.14■□□□□ 0.01
PDLIM7-215ENST00000506161 FBN3Q75N90 2809 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 SYT5O00445 386 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 SCAMP2O15127 329 aaKnown RBP15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 SLITRK5O94991 958 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 IFI6P09912 130 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 PRPS2P11908 318 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 UQCRC1P31930 480 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 SERPINB4P48594 390 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 RNF144AP50876 292 aaPredicted RBP15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 CCNJQ5T5M9 372 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 MFSD12Q6NUT3 480 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 FIGNL1Q6PIW4 674 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 ARSKQ6UWY0 536 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 LSRQ86X29 649 aaPredicted RBP15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 ZZZ3Q8IYH5 903 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 GCNT2Q8N0V5 402 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 ZNF781Q8N8C0 355 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 OR4C3Q8NH37 302 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 FAM110BQ8TC76 370 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 DUSP19Q8WTR2 217 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 FAM120BQ96EK7 910 aaKnown RBP15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 PPP1R36Q96LQ0 422 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 SFXN2Q96NB2 322 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 SORT1Q99523 831 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 Q9N2J8 555 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 JKAMPQ9P055 326 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 PPP4R1LQ9P1A2 415 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 DKKL1Q9UK85 242 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 RAB21Q9UL25 225 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 KCNE3Q9Y6H6 103 aa15.13■□□□□ 0.01
PDLIM7-215ENST00000506161 H0Y3Z8 333 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 HCRTR2O43614 444 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 DHRS4L1P0CG22 281 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 GPC1P35052 558 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 ASCL1P50553 236 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 MANFP55145 182 aaKnown RBP15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 DECR1Q16698 335 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 FBXL19-AS1Q494R0 122 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 IL23RQ5VWK5 629 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 RIMKLAQ8IXN7 391 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 GATSQ8NAP1 163 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 OR4K17Q8NGC6 315 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 GPR151Q8TDV0 419 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 SLC9A6Q92581 669 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 ZIM3Q96PE6 472 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 ZNF559Q9BR84 538 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 CXorf36Q9H7Y0 433 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 CALHM2Q9HA72 323 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 ACSS1Q9NUB1 689 aaPredicted RBP15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 FAM120CQ9NX05 1096 aaKnown RBP15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 KCNN3Q9UGI6 736 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 TMED5Q9Y3A6 229 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 MRPS18CQ9Y3D5 142 aaKnown RBP15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 ZNF337Q9Y3M9 751 aa15.12■□□□□ 0.01
PDLIM7-215ENST00000506161 NPIPA5A0A0B4J1W7 369 aa15.11■□□□□ 0.01
PDLIM7-215ENST00000506161 NPIPA7E9PJI5 369 aa15.11■□□□□ 0.01
PDLIM7-215ENST00000506161 KCNK2O95069 426 aa15.11■□□□□ 0.01
PDLIM7-215ENST00000506161 OXSR1O95747 527 aaPredicted RBP15.11■□□□□ 0.01
PDLIM7-215ENST00000506161 CHEK2O96017 543 aa15.11■□□□□ 0.01
PDLIM7-215ENST00000506161 IL2RAP01589 272 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms