RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 MED27Q6P2C8 311 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 C16orf89Q6UX73 402 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 RPTNQ6XPR3 784 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 SPNS3Q6ZMD2 512 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 MICU3Q86XE3 530 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 GCNT2Q8N0V5 402 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 ZNF321PQ8N8H1 164 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 ZNF610Q8N9Z0 462 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 OR9A4Q8NGU2 314 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 RNF141Q8WVD5 230 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 MBD6Q96DN6 1003 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 LRFN5Q96NI6 719 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 ALKBH3Q96Q83 286 aaPredicted RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 TRIB1Q96RU8 372 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 CYTH2Q99418 400 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 ACOX2Q99424 681 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 GPR27Q9NS67 375 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 P4HTMQ9NXG6 502 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 GCNT4Q9P109 453 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 SCP2D1Q9UJQ7 156 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 PCDH15Q96QU1 1955 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 DRGXA6NNA5 263 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 DDX39AO00148 427 aaKnown RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 PIRO00625 290 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 DCLK1O15075 740 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 CTDSPLO15194 276 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 UBDO15205 165 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 SURF4O15260 269 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 PLPP2O43688 288 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 PRAMEF12O95522 483 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 EGFP01133 1207 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 GABRA1P14867 456 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 ZNF44P15621 663 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 TNNI3P19429 210 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 S1PR1P21453 382 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 NR0B1P51843 470 aaKnown RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 ATXN1P54253 815 aaKnown RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 NAGLUP54802 743 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 PRPS1P60891 318 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 SP3Q02447 781 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 STX4Q12846 297 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 CTTNQ14247 550 aaKnown RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 RTP5Q14D33 572 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 ARHGAP44Q17R89 818 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 TRAT1Q6PIZ9 186 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 TMEM270Q6UE05 265 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 PAQR9Q6ZVX9 377 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 CHST9Q7L1S5 443 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 CHST3Q7LGC8 479 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 DCXRQ7Z4W1 244 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 TP53INP2Q8IXH6 220 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 GPR137CQ8N3F9 429 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 DNAJC22Q8N4W6 341 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 PARP16Q8N5Y8 322 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 ZNF557Q8N988 423 aaPredicted RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 RND1Q92730 232 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 EXOSC8Q96B26 276 aaKnown RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 OMA1Q96E52 524 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 CMTM7Q96FZ5 175 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 ZNF514Q96K75 400 aaPredicted RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 TEX37Q96LM6 180 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 HIST1H2AAQ96QV6 131 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 CNN2Q99439 309 aaKnown RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 CITED2Q99967 270 aaPredicted RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 REEP2Q9BRK0 252 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 LXNQ9BS40 222 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 ZNF577Q9BSK1 485 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 LRRC2Q9BYS8 371 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 BLZF1Q9H2G9 400 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 TUBA4BQ9H853 241 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 NT5MQ9NPB1 228 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 LHX9Q9NQ69 397 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 TMEM30AQ9NV96 361 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 AURKAIP1Q9NWT8 199 aaPredicted RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 SPG21Q9NZD8 308 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 HEY2Q9UBP5 337 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 MOKQ9UQ07 419 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 TMED3Q9Y3Q3 217 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 EYSQ5T1H1 3165 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 COL5A1P20908 1838 aaPredicted RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 A0A0G2JK05 382 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 NCF1BA6NI72 391 aaPredicted RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 NCF1CA8MVU1 366 aaPredicted RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 M0QZQ0 153 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 MDM4O15151 490 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 SLC16A6O15403 523 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 ADAM12O43184 909 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 HPP00738 406 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 LRG1P02750 347 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 FHP07954 510 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 UNGP13051 313 aaPredicted RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 HLA-EP13747 358 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 ANXA7P20073 488 aaKnown RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 ADRA1DP25100 572 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 MAGEA12P43365 314 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 RGS6P49758 472 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 NDUFV1P49821 464 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 TDGF1P3P51864 188 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 CDC42P60953 191 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 CXADRP78310 365 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms