RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 IL10P22301 178 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 DNAJB1P25685 340 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 MAPK3P27361 379 aaPredicted RBP2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 ASMTP46597 345 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 CDKN3Q16667 212 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 ADPRMQ3LIE5 342 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 PARP10Q53GL7 1025 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 C9orf129Q5T035 196 aaKnown RBP2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 ZNF658Q5TYW1 1059 aaPredicted RBP2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 RSBN1Q5VWQ0 802 aaPredicted RBP2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 STAC2Q6ZMT1 411 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 CYS1Q717R9 158 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 ZNF677Q86XU0 584 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 APOBEC3FQ8IUX4 373 aaKnown RBP2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 BCORP1Q8N888 145 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 CNNM3Q8NE01 707 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 OR52B4Q8NGK2 314 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 OR13F1Q8NGS4 319 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 GIPC3Q8TF64 312 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 FAF2Q96CS3 445 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 DPH7Q9BTV6 452 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 TBC1D10AQ9BXI6 508 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 TEX13BQ9BXU2 312 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 ACTR8Q9H981 624 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 GPN2Q9H9Y4 310 aaPredicted RBP2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 IL17CQ9P0M4 197 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 HOOK1Q9UJC3 728 aaKnown RBP2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 KLHL21Q9UJP4 597 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 ODF2LQ9ULJ1 636 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 PARD3Q8TEW0 1356 aa2.9□□□□□ -1.94
TOPBP1-204ENST00000505804 IGLV8-61A0A075B6I0 122 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 FAM230AA0A1W2PPH8 454 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 ZSCAN5BA6NJL1 495 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 ANKRD30BLA7E2S9 258 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 WASHC1A8K0Z3 465 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 WASH3PC4AMC7 463 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 RAMP1O60894 148 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 TOM1L1O75674 476 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 ZNF19P17023 458 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 EMDP50402 254 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 P2RY4P51582 365 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 GMFBP60983 142 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 KCNJ11Q14654 390 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 DCAF4L1Q3SXM0 396 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 TMEM52BQ4KMG9 183 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 UFSP1Q6NVU6 142 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 WASH2PQ6VEQ5 465 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 CERS5Q8N5B7 392 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 KCNK16Q96T55 309 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 COMMD4Q9H0A8 199 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 LPAR2Q9HBW0 351 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 PLSCR3Q9NRY6 295 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 UTP6Q9NYH9 597 aaKnown RBP2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 EHFQ9NZC4 300 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 FOXJ3Q9UPW0 622 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 L3MBTL1Q9Y468 752 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 NCAPD2Q15021 1401 aa2.9□□□□□ -1.95
TOPBP1-204ENST00000505804 ANKRD30BQ9BXX2 1392 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 E9PLD3 99 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 CDX4O14627 284 aaPredicted RBP2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 STAM2O75886 525 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 CCDC166P0CW27 439 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 UQCRBP14927 111 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 ARF4P18085 180 aaPredicted RBP2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 XRCC1P18887 633 aaPredicted RBP2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 PAICSP22234 425 aaKnown RBP2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 NF2P35240 595 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 CYLC1P35663 651 aaPredicted RBP2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 RPL4P36578 427 aaKnown RBP2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 CAMLGP49069 296 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 NOVA1P51513 510 aaKnown RBP2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 GPC3P51654 580 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 LYZP61626 148 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 ISXQ2M1V0 245 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 PAGE2BQ5JRK9 111 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 ERASQ7Z444 233 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 SYVN1Q86TM6 617 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 EFCAB13Q8IY85 973 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 CEND1Q8N111 149 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 CADM2Q8N3J6 435 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 BPIFB2Q8N4F0 458 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 STKLD1Q8NE28 680 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 ANKRD20A12PQ8NF67 263 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 C18orf25Q96B23 403 aaPredicted RBP2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 UPRTQ96BW1 309 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 SLC25A38Q96DW6 304 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 VSTM2LQ96N03 204 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 KIR2DL4Q99706 377 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 TMEM121Q9BTD3 319 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 NFKBIZQ9BYH8 718 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 GLT8D2Q9H1C3 349 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 SLC25A51Q9H1U9 297 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 VAT1LQ9HCJ6 419 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 RBM28Q9NW13 759 aaKnown RBP2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 ATXN10Q9UBB4 475 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 APOBEC3BQ9UH17 382 aaKnown RBP2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 ATP6V1HQ9UI12 483 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 CELA1Q9UNI1 258 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 MGAT4BQ9UQ53 548 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms