RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 AFF3P51826 1226 aaKnown RBP16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 NUDT6P53370 316 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 SLC13A2Q13183 592 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 AQP6Q13520 282 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 GINS1Q14691 196 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 DEFB110Q30KQ9 67 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 RPL13AP3Q6NVV1 102 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 GRAMD2AQ8IUY3 354 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 TMEFF1Q8IYR6 380 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 RIT1Q92963 219 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 VMP1Q96GC9 406 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 TMEM80Q96HE8 168 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 DGAT2Q96PD7 388 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 TBC1D17Q9HA65 648 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 SOHLH2Q9NX45 425 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 TMEM5Q9Y2B1 443 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 GPR55Q9Y2T6 319 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 A0A0A6YYC8 382 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 CDHR4A6H8M9 788 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 I3L1I5 382 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 NUDT21O43809 227 aaKnown RBP16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 GABRA3P34903 492 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 TRHRP34981 398 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 STT3AP46977 705 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 CXCL12P48061 93 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 RAB15P59190 212 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 SPCS2Q15005 226 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 GPR68Q15743 365 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 KLHL22Q53GT1 634 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 MAMSTRQ6ZN01 415 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 SLC46A3Q7Z3Q1 461 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 GDF7Q7Z4P5 450 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 CMIPQ8IY22 773 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 SLC43A2Q8N370 569 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 OR52R1Q8NGF1 315 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 S100ZQ8WXG8 99 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 ZNF559Q9BR84 538 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 G6PC3Q9BUM1 346 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 STARD5Q9NSY2 213 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 MRPS18AQ9NVS2 196 aaKnown RBP16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 ERGIC3Q9Y282 383 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 HRO43593 1189 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 TPST2O60704 377 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 ENTPD6O75354 484 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 RPLP0P05388 317 aaKnown RBP16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 GPLD1P80108 840 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 EFNB1P98172 346 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 YOD1Q5VVQ6 348 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 ZNF613Q6PF04 617 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 KMT5CQ86Y97 462 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 PLXDC1Q8IUK5 500 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 HS6ST2Q96MM7 605 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 TBC1D23Q9NUY8 699 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 MMACHCQ9Y4U1 282 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 KLF4O43474 513 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 HCRTR1O43613 425 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 INHBBP09529 407 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 MSL3P1P0C860 447 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 IL9P15248 144 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 ZNF136P52737 540 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 BNIP3Q12983 259 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 WDR53Q7Z5U6 358 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 NLGN4XQ8N0W4 816 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 TCEANCQ8N8B7 351 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 KBTBD8Q8NFY9 601 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 TMEM163Q8TC26 289 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 LGALS12Q96DT0 336 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 AHCYL2Q96HN2 611 aaKnown RBP16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 FOLH1BQ9HBA9 442 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 AMBNQ9NP70 447 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 IL20Q9NYY1 176 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 TVP23BQ9NYZ1 205 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 PRODH2Q9UF12 536 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 HEMK1Q9Y5R4 338 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 A3GALT2U3KPV4 340 aa16.06■□□□□ 0.16
TRAPPC11-204ENST00000505676 LAMA3Q16787 3333 aa16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 SCN3AQ9NY46 2000 aa16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 CCDC163A0A0D9SF12 145 aa16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 EFCAB9A8MZ26 197 aa16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 BCAT2O15382 392 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 HMGN1P05114 100 aa16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 CT62P0C5K7 136 aa16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 S1PR1P21453 382 aa16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 HOXA6P31267 233 aa16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 FNTBP49356 437 aa16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 CLK1P49759 484 aaKnown RBP16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 MRPL2Q5T653 305 aaKnown RBP16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 DEFB119Q8N690 84 aa16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 OR7G1Q8NGA0 311 aa16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 IL4I1Q96RQ9 567 aa16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 MND1Q9BWT6 205 aa16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 WDR12Q9GZL7 423 aaKnown RBP16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 Q9N2J8 555 aa16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 IRAK4Q9NWZ3 460 aa16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 SEMA5BQ9P283 1151 aa16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 GMEB2Q9UKD1 530 aa16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.05■□□□□ 0.16
TRAPPC11-204ENST00000505676 M0R082 166 aa16.04■□□□□ 0.16
TRAPPC11-204ENST00000505676 DUX1O43812 170 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms