RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 SLX4IPQ5VYV7 408 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 FAM71F2Q6NXP2 309 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 CCBE1Q6UXH8 406 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 FRRS1Q6ZNA5 592 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 STOX1Q6ZVD7 989 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 CCDC80Q76M96 950 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 CEACAM19Q7Z692 300 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 CATSPERDQ86XM0 798 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 TGIF2LXQ8IUE1 241 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 CCDC50Q8IVM0 306 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 APLFQ8IW19 511 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 TMEM123Q8N131 208 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 Q8N9G6 341 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 ZSCAN4Q8NAM6 433 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 OR52B6Q8NGF0 335 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 OR4D5Q8NGN0 318 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 LRRC15Q8TF66 581 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 C18orf25Q96B23 403 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 BIRC7Q96CA5 298 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 AMDHD1Q96NU7 426 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 RCHY1Q96PM5 261 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 DGCR6LQ9BY27 220 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 FAM192AQ9GZU8 254 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 YY1AP1Q9H869 796 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 DDX18Q9NVP1 670 aaKnown RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 SMOXQ9NWM0 555 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 TAS2R16Q9NYV7 291 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 THYN1Q9P016 225 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 SUN2Q9UH99 717 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 ANAPC7Q9UJX3 599 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 GMPPBQ9Y5P6 360 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 IGHV3-20A0A0C4DH32 117 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 TRBV7-9A0A0J9YWB2 115 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 ARHGEF35A5YM69 484 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 IGLON5A6NGN9 336 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 SNTNA6NMZ2 147 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 BMPR1BO00238 502 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 OR7A17O14581 309 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 PPIHO43447 177 aaKnown RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 NUDT14O95848 222 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 H2BFMP0C1H6 154 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 PRKACGP22612 351 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 PPP2R1BP30154 601 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 SLC1A4P43007 532 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 FNTAP49354 379 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 CCT3P49368 545 aaKnown RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 EWSR1Q01844 656 aaKnown RBP eCLIP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 BST1Q10588 318 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 COX10Q12887 443 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 CHI3L2Q15782 390 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 PCK2Q16822 640 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 GGTA1PQ4G0N0 100 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 FAM53AQ6NSI3 398 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 KCNIP4Q6PIL6 250 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 APOOLQ6UXV4 268 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 KIF6Q6ZMV9 814 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 Q6ZSR9 355 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 HSD11B1LQ7Z5J1 315 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 MOB3BQ86TA1 216 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 CDR2LQ86X02 465 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 ZNF781Q8N8C0 355 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 SAMD12Q8N8I0 201 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 BBOF1Q8ND07 529 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 TRPV1Q8NER1 839 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 NUP37Q8NFH4 326 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 OR10A7Q8NGE5 316 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 GMPPAQ96IJ6 420 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 CCNL2Q96S94 520 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 FAM173AQ9BQD7 235 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 TTYH2Q9BSA4 534 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 UTP6Q9NYH9 597 aaKnown RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 TRBV5-4A0A0C4DH59 114 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 C11orf98E9PRG8 122 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 TIMM8AO60220 97 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 CACNG3O60359 315 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 LMX1BO60663 402 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 RAMP1O60894 148 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 NXPH4O95158 308 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 LRATO95237 230 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 TSPAN12O95859 305 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 PGK1P00558 417 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 ASGR1P07306 291 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 HBQ1P09105 142 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 OR9G9P0C7N8 305 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 TROVE2P10155 538 aaKnown RBP eCLIP3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 POU2F1P14859 743 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 CCR1P32246 355 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 MMP12P39900 470 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 OPRL1P41146 370 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 MAGEA8P43361 318 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 BRCC3P46736 316 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 PRMT2P55345 433 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 LINC01547P58512 204 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 HAND2P61296 217 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 RGS1Q08116 209 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 SRSF5Q13243 272 aaKnown RBP3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 TMEM187Q14656 261 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 ZNF718Q3SXZ3 478 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 ZNF585BQ52M93 769 aa3.26□□□□□ -1.89
TRAPPC13-208ENST00000505553 CTSL3PQ5NE16 218 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms