RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 PRODHO43272 600 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 TNNI3P19429 210 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 TGFBR2P37173 567 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 RBM34P42696 430 aaKnown RBP10.55□□□□□ -0.72
NFKB1-205ENST00000505458 STT3AP46977 705 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 GPLD1P80108 840 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 RAB40BQ12829 278 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 TMED1Q13445 227 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 FZD5Q13467 585 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 GAS6Q14393 721 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 ZNF550Q7Z398 422 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 PLEKHA8Q96JA3 519 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 OR1F2PQ96R84 312 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 Q9N2J8 555 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 SOHLH2Q9NX45 425 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 GMEB2Q9UKD1 530 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 BAIAP2Q9UQB8 552 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 EXOSC1Q9Y3B2 195 aaKnown RBP10.55□□□□□ -0.72
NFKB1-205ENST00000505458 CCDC163A0A0D9SF12 145 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 CLDN25C9JDP6 229 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 RAB36O95755 333 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 WNT1P04628 370 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 STSP08842 583 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 MSL3P1P0C860 447 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 TRMT12Q53H54 448 aaKnown RBP10.55□□□□□ -0.72
NFKB1-205ENST00000505458 C3orf38Q5JPI3 329 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 TUBA3EQ6PEY2 450 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 PLXDC1Q8IUK5 500 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 UBE2FQ969M7 185 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 PPP1R14BQ96C90 147 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 LGALS12Q96DT0 336 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 DACH2Q96NX9 599 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 DUSP15Q9H1R2 295 aaPredicted RBP10.55□□□□□ -0.72
NFKB1-205ENST00000505458 FBXO8Q9NRD0 319 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 A0A1W2PS29 197 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 CDHR4A6H8M9 788 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 CPSF4LA6NMK7 179 aaKnown RBP10.54□□□□□ -0.72
NFKB1-205ENST00000505458 CCRL2O00421 344 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 DUX1O43812 170 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 TP53P04637 393 aaPredicted RBP10.54□□□□□ -0.72
NFKB1-205ENST00000505458 LCKP06239 509 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 INHBBP09529 407 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 CAPZA2P47755 286 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 OMPP47874 163 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 AFF3P51826 1226 aaKnown RBP10.54□□□□□ -0.72
NFKB1-205ENST00000505458 SLC13A2Q13183 592 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 SPCS2Q15005 226 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 MINDY4Q4G0A6 757 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 MAMSTRQ6ZN01 415 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 GDF7Q7Z4P5 450 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 OR4N5Q8IXE1 308 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 OR52L1Q8NGH7 329 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 OR9A4Q8NGU2 314 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 RIT1Q92963 219 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 RSPO3Q9BXY4 272 aaPredicted RBP10.54□□□□□ -0.72
NFKB1-205ENST00000505458 MMP27Q9H306 513 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 SEMA4GQ9NTN9 838 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 IL20Q9NYY1 176 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 SCN3AQ9NY46 2000 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 MYL12BO14950 172 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 NUDT21O43809 227 aaKnown RBP10.54□□□□□ -0.72
NFKB1-205ENST00000505458 MAN1A2O60476 641 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 LDB3O75112 727 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 ENTPD6O75354 484 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 DBTP11182 482 aaKnown RBP10.54□□□□□ -0.72
NFKB1-205ENST00000505458 MYL12AP19105 171 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 ENDOUP21128 410 aaKnown RBP10.54□□□□□ -0.72
NFKB1-205ENST00000505458 GABRA4P48169 554 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 COPZ1P61923 177 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 ZNF91Q05481 1191 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 BNIP3Q12983 259 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 AQP6Q13520 282 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 SNAPC1Q16533 368 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 ARMCX4Q5H9R4 360 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 SLCO6A1Q86UG4 719 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 TCEANCQ8N8B7 351 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 DYNC2LI1Q8TCX1 351 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 BRIX1Q8TDN6 353 aaKnown RBP10.54□□□□□ -0.72
NFKB1-205ENST00000505458 RLN3Q8WXF3 142 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 ART5Q96L15 291 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 TSSK6Q9BXA6 273 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 HOXD1Q9GZZ0 328 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 FN3KQ9H479 309 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 FGF20Q9NP95 211 aaPredicted RBP10.54□□□□□ -0.72
NFKB1-205ENST00000505458 MRTO4Q9UKD2 239 aaKnown RBP10.54□□□□□ -0.72
NFKB1-205ENST00000505458 HEMK1Q9Y5R4 338 aaPredicted RBP10.54□□□□□ -0.72
NFKB1-205ENST00000505458 FCMRO60667 390 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 PIAS2O75928 621 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 RCBTB2O95199 551 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 SOX14O95416 240 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 CBX7O95931 251 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 NUDT6P53370 316 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 GPR68Q15743 365 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 COMTD1Q86VU5 262 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 GID4Q8IVV7 300 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 MINDY2Q8NBR6 621 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 AHCYL2Q96HN2 611 aaKnown RBP10.54□□□□□ -0.72
NFKB1-205ENST00000505458 LRFN5Q96NI6 719 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 MAP3K3Q99759 626 aa10.54□□□□□ -0.72
NFKB1-205ENST00000505458 FOLH1BQ9HBA9 442 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms