RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 C1orf226A1L170 272 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 FRG2CA6NGY1 282 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 LRRC14BA6NHZ5 514 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 OR6C70A6NIJ9 312 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 H3BML4 177 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 TO15178 435 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 POLR3GO15318 223 aaPredicted RBP8.16□□□□□ -1.1
DHFR-202ENST00000504396 SCO2O43819 266 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 ESRRBO95718 433 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 PLGP00747 810 aaPredicted RBP8.16□□□□□ -1.1
DHFR-202ENST00000504396 IFNA2P01563 188 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 MTHFD2P13995 350 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 CSNK2A2P19784 350 aaPredicted RBP8.16□□□□□ -1.1
DHFR-202ENST00000504396 S1PR1P21453 382 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 DRD5P21918 477 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 GRK2P25098 689 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 PPICP45877 212 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 GPX6P59796 221 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 MRPS35P82673 323 aaKnown RBP8.16□□□□□ -1.1
DHFR-202ENST00000504396 CALCOCO2Q13137 446 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 STX5Q13190 355 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 TNK1Q13470 666 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 LTB4RQ15722 352 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 FAM83EQ2M2I3 478 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 PRICKLE4Q2TBC4 344 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 FAM180BQ6P0A1 224 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 ZNF704Q6ZNC4 412 aaPredicted RBP8.16□□□□□ -1.1
DHFR-202ENST00000504396 GOLGA7Q7Z5G4 137 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 KCTD4Q8WVF5 259 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 FIG4Q92562 907 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 CAVIN3Q969G5 261 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 NXNL1Q96CM4 212 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 MRPL1Q9BYD6 325 aaKnown RBP8.16□□□□□ -1.1
DHFR-202ENST00000504396 MAT2BQ9NZL9 334 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 WHRNQ9P202 907 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 RNF14Q9UBS8 474 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 ZNF639Q9UID6 485 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 PSME2Q9UL46 239 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 ZNF780BQ9Y6R6 833 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 TLN2Q9Y4G6 2542 aa8.16□□□□□ -1.1
DHFR-202ENST00000504396 HEATR5AQ86XA9 2040 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 A0A087X1B8 175 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 ERLIN1O75477 346 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 BCAS2O75934 225 aaPredicted RBP8.15□□□□□ -1.1
DHFR-202ENST00000504396 SIX3O95343 332 aaPredicted RBP8.15□□□□□ -1.1
DHFR-202ENST00000504396 CLDN9O95484 217 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 ALDOAP04075 364 aaKnown RBP8.15□□□□□ -1.1
DHFR-202ENST00000504396 GSTP1P09211 210 aaKnown RBP8.15□□□□□ -1.1
DHFR-202ENST00000504396 PEPDP12955 493 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 PAX1P15863 534 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 HK1P19367 917 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 TBXA2RP21731 343 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 STX2P32856 288 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 ADMP35318 185 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 PAFAH1B1P43034 410 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 KIR2DL2P43627 348 aaPredicted RBP8.15□□□□□ -1.1
DHFR-202ENST00000504396 CCNG1P51959 295 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 EEFSECP57772 596 aaKnown RBP8.15□□□□□ -1.1
DHFR-202ENST00000504396 IRF9Q00978 393 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 IFT88Q13099 833 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 EFR3AQ14156 821 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 ACAP2Q15057 778 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 PON3Q15166 354 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 SGCBQ16585 318 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 CLEC12BQ2HXU8 276 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 TRMT12Q53H54 448 aaKnown RBP8.15□□□□□ -1.1
DHFR-202ENST00000504396 BEX5Q5H9J7 111 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 SLC48A1Q6P1K1 146 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 KLC3Q6P597 504 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 PODNL1Q6PEZ8 512 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 C3orf62Q6ZUJ4 267 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 LARP4Q71RC2 724 aaKnown RBP eCLIP8.15□□□□□ -1.1
DHFR-202ENST00000504396 HDXQ7Z353 690 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 CREG2Q8IUH2 290 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 PHC2Q8IXK0 858 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 CEP112Q8N8E3 955 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 ZNF610Q8N9Z0 462 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 OR5M1Q8NGP8 315 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 FNDC9Q8TBE3 224 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 EFHD2Q96C19 240 aaPredicted RBP8.15□□□□□ -1.1
DHFR-202ENST00000504396 ERP27Q96DN0 273 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 SLC35A4Q96G79 324 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 PLPPR2Q96GM1 343 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 PARD6BQ9BYG5 372 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 PRRG4Q9BZD6 226 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 FAM107BQ9H098 131 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 STMN4Q9H169 189 aaPredicted RBP8.15□□□□□ -1.1
DHFR-202ENST00000504396 DPH5Q9H2P9 285 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 ELOVL6Q9H5J4 265 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 NOL11Q9H8H0 719 aaKnown RBP8.15□□□□□ -1.1
DHFR-202ENST00000504396 YAE1D1Q9NRH1 226 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 SENP1Q9P0U3 644 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 TMCO1Q9UM00 188 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 SLC12A4Q9UP95 1085 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 LAMP3Q9UQV4 416 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 OR10H1Q9Y4A9 318 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 PCDHA9Q9Y5H5 950 aa8.15□□□□□ -1.1
DHFR-202ENST00000504396 C17orf51A8MQB3 221 aa8.14□□□□□ -1.11
DHFR-202ENST00000504396 H0YC42 278 aa8.14□□□□□ -1.11
DHFR-202ENST00000504396 H3BQF6 201 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms