RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 HSPA12AO43301 675 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 NARSO43776 548 aaKnown RBP15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 FARS2O95363 451 aaKnown RBP15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 HTR2AP28223 471 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 GRPRP30550 384 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 HTR2BP41595 481 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 PRLHRP49683 370 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 NKX2-5P52952 324 aaPredicted RBP15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 ACTBP60709 375 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 ACTG1P63261 375 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 RHEBQ15382 184 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 TMPRSS9Q7Z410 1059 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 CPOQ8IVL8 374 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 TRMT10AQ8TBZ6 339 aaKnown RBP15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 RTP3Q9BQQ7 232 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 RARRES3Q9UL19 164 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 CENPBD1B2RD01 187 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 AOAHP28039 575 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 SEMA3BQ13214 749 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 GAL3ST3Q96A11 431 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 ALG8Q9BVK2 526 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 SLC5A7Q9GZV3 580 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 MEPEQ9NQ76 525 aaPredicted RBP15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 NDUFB2O95178 105 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 TFAP2AP05549 437 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 CCR7P32248 378 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 PITPNBP48739 271 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 ERVFC1P60507 584 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 RAB40BQ12829 278 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 TBCEQ15813 527 aaPredicted RBP15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 SFRP4Q6FHJ7 346 aaPredicted RBP15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 P4HA3Q7Z4N8 544 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 LSMEM2Q8N112 164 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 CDRT4Q8N9R6 151 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 BMFQ96LC9 184 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 SERINC2Q96SA4 455 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 NUFIP1Q9UHK0 495 aaKnown RBP15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 KIAA0100Q14667 2235 aaKnown RBP15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 KIR2DS5A0A0G2JLQ3 304 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 A0A0G2JNG1 304 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 ANTXRLA6NF34 631 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 H3BQ06 376 aaPredicted RBP15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 KIR2DS3K7RE56 304 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 ATE1O95260 518 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 SHC2P98077 582 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 KIR2DS5Q14953 304 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 RAB11BQ15907 218 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 LRRC26Q2I0M4 334 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 DESI1Q6ICB0 168 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 FAM180BQ6P0A1 224 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 C1orf94Q6P1W5 598 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 LEG1Q6P5S2 330 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 CNIH2Q6PI25 160 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 OR5L2Q8NGL0 311 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 FAM46BQ96A09 425 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 TIMM29Q9BSF4 260 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 LATO43561 262 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 ZNF84P51523 738 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 CTSL3PQ5NE16 218 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 ANKRD54Q6NXT1 300 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 ANKRD33Q7Z3H0 272 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 TOR1AIP2Q8NFQ8 470 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 IGLV3-10A0A075B6K4 115 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 MAS1P04201 325 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 GJA4P35212 333 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 HSD11B2P80365 405 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 MRPS21P82921 87 aaKnown RBP15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 FAM78AQ5JUQ0 283 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 MSLNLQ96KJ4 702 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 OR10A4Q9H209 315 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 CNIH4Q9P003 139 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 PAPPAQ13219 1627 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 RAD51DO75771 328 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 ALPLP05186 524 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 IL1RNP18510 177 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 P2RY2P41231 377 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 RNASE10Q5GAN6 216 aaKnown RBP15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 SLC18B1Q6NT16 456 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 Q6ZSR6 202 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 MAMDC2Q7Z304 686 aaPredicted RBP15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 ZER1Q7Z7L7 766 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 B3GNT8Q7Z7M8 397 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 OR13C3Q8NGS6 347 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 HAVCR2Q8TDQ0 301 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 KHSRPQ92945 711 aaKnown RBP eCLIP15.25■□□□□ 0.032e-6■■■■■ 27.2
HMGXB3-202ENST00000503427 PRRC1Q96M27 445 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 FANCFQ9NPI8 374 aa15.25■□□□□ 0.03
HMGXB3-202ENST00000503427 C7orf72A4D263 438 aa15.24■□□□□ 0.03
HMGXB3-202ENST00000503427 SFTPBP07988 381 aa15.24■□□□□ 0.03
HMGXB3-202ENST00000503427 SYPP08247 313 aa15.24■□□□□ 0.03
HMGXB3-202ENST00000503427 HBQ1P09105 142 aa15.24■□□□□ 0.03
HMGXB3-202ENST00000503427 SOX3P41225 446 aa15.24■□□□□ 0.03
HMGXB3-202ENST00000503427 RGS6P49758 472 aa15.24■□□□□ 0.03
HMGXB3-202ENST00000503427 CTSCP53634 463 aa15.24■□□□□ 0.03
HMGXB3-202ENST00000503427 NKAPLQ5M9Q1 402 aa15.24■□□□□ 0.03
HMGXB3-202ENST00000503427 BCL2L15Q5TBC7 163 aa15.24■□□□□ 0.03
HMGXB3-202ENST00000503427 GAREM2Q75VX8 874 aa15.24■□□□□ 0.03
HMGXB3-202ENST00000503427 NAXEQ8NCW5 288 aa15.24■□□□□ 0.03
HMGXB3-202ENST00000503427 DEDD2Q8WXF8 326 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms