RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 SULT2A1Q06520 285 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 SMARCB1Q12824 385 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 ART3Q13508 389 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 CEACAM7Q14002 265 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 SFT2D3Q587I9 215 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 LCN8Q6JVE9 175 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 FAM53AQ6NSI3 398 aaPredicted RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 NEPROQ6NW34 567 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 TTC23LQ6PF05 361 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 CMC1Q7Z7K0 106 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 TMEM173Q86WV6 379 aaPredicted RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 CDR2LQ86X02 465 aaPredicted RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 CARM1Q86X55 608 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 SNX32Q86XE0 403 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 CLYBLQ8N0X4 340 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 ATPAF2Q8N5M1 289 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 TEX26Q8N6G2 289 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 NPWQ8N729 165 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 RTL3Q8N8U3 475 aaKnown RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 CCNYQ8ND76 341 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 DDHD1Q8NEL9 900 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 TSPAN14Q8NG11 270 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 OR52K1Q8NGK4 314 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 OR10S1Q8NGN2 331 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 OR1J1Q8NGS3 322 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 MAPK15Q8TD08 544 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 PYDC1Q8WXC3 89 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 ATL1Q8WXF7 558 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 LPGAT1Q92604 370 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 IMP4Q96G21 291 aaKnown RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 DCUN1D1Q96GG9 259 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 SENP8Q96LD8 212 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 FAM210AQ96ND0 272 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 ZNF599Q96NL3 588 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 SERPINB11Q96P15 392 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 OR52B2Q96RD2 323 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 CDRT15Q96T59 188 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 PARK7Q99497 189 aaKnown RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 NDNQ99608 321 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 DOK1Q99704 481 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 TBL1YQ9BQ87 522 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 BCL7BQ9BQE9 202 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 FNDC11Q9BVV2 318 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 NUSAP1Q9BXS6 441 aaKnown RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 ULBP1Q9BZM6 244 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 VN1R1Q9GZP7 353 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 UPF3AQ9H1J1 476 aaKnown RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 DPEP3Q9H4B8 488 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 NXF3Q9H4D5 531 aaKnown RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 C20orf96Q9NUD7 363 aaPredicted RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 DDX18Q9NVP1 670 aaKnown RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 DDIT4Q9NX09 232 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 ACTR3BQ9P1U1 418 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 RHCGQ9UBD6 479 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 ZNF639Q9UID6 485 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 FBXO5Q9UKT4 447 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 PPIEQ9UNP9 301 aaKnown RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 PTRH2Q9Y3E5 179 aaKnown RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 AP4S1Q9Y587 144 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 AP4B1Q9Y6B7 739 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 AP1M2Q9Y6Q5 423 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 PLXNA3P51805 1871 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 A0A087WXM4 84 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 LOC285095A0A1B0GVY8 99 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 YJEFN3A6XGL0 299 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 HEPACAM2A8MVW5 462 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 E9PBE3 544 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 H0YAE9 185 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 KCNK1O00180 336 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 PSMD12O00232 456 aaPredicted RBP4.27□□□□□ -1.73
SSR3-209ENST00000498205 UBDO15205 165 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 ATP6V0E1O15342 81 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 XRCC3O43542 346 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 SNAP91O60641 907 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 KLHL41O60662 606 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 VAPBO95292 243 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 BAG2O95816 211 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 PGK1P00558 417 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 FGF1P05230 155 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 ACP2P11117 423 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 ODC1P11926 461 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 IDO1P14902 403 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 PSMC3P17980 439 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 IL1RNP18510 177 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 XRCC1P18887 633 aaPredicted RBP4.27□□□□□ -1.73
SSR3-209ENST00000498205 ADORA2BP29275 332 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 ALDH4A1P30038 563 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 CEACAM8P31997 349 aaPredicted RBP4.27□□□□□ -1.73
SSR3-209ENST00000498205 PEX19P40855 299 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 MAGEA11P43364 429 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 CDK9P50750 372 aaKnown RBP4.27□□□□□ -1.73
SSR3-209ENST00000498205 NUP107P57740 925 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 HILS1P60008 231 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 PSME3P61289 254 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 HERVK_113P63132 956 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 TYSND1Q2T9J0 566 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 PARP15Q460N3 678 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 NHSL2Q5HYW2 709 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 SYPL2Q5VXT5 272 aa4.27□□□□□ -1.73
SSR3-209ENST00000498205 BSPRYQ5W0U4 402 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms