RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 LUZP2Q86TE4 346 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CYP4Z1Q86W10 505 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 NME8Q8N427 588 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 OR10V1Q8NGI7 309 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 NDNFQ8TB73 568 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ACTRT1Q8TDG2 376 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 OTUD7AQ8TE49 926 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 SCFD2Q8WU76 684 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CCDC124Q96CT7 223 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 RAX2Q96IS3 184 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 SLC46A1Q96NT5 459 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 EBNA1BP2Q99848 306 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 MICU1Q9BPX6 476 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DDX50Q9BQ39 737 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 APOOQ9BUR5 198 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 FICDQ9BVA6 458 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 R3HDMLQ9H3Y0 253 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 MEAF6Q9HAF1 191 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 RNPEPL1Q9HAU8 725 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 PARVBQ9HBI1 364 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 NIT2Q9NQR4 276 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ABCB10Q9NRK6 738 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 METTL5Q9NRN9 209 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 CALML5Q9NZT1 146 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 IL17CQ9P0M4 197 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 LUZP4Q9P127 313 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 RASAL2Q9UJF2 1139 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 PSME2Q9UL46 239 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 EXOC7Q9UPT5 735 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 AP3M1Q9Y2T2 418 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 GRIP1Q9Y3R0 1128 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 WIF1Q9Y5W5 379 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CPQQ9Y646 472 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DOT1LQ8TEK3 1739 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 TRAV8-7A0A075B6U6 113 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 C9orf118A6NHY6 69 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TMEM233B4DJY2 109 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 J3QRE1 110 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SGK1O00141 431 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ZNF208O43345 1280 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 KLF4O43474 513 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 FCGR3BO75015 233 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PEX11AO75192 247 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 UGT2B11O75310 529 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 FARS2O95363 451 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 TNFAIP8O95379 198 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 HLA-DQB1P01920 261 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SUPT20HL2P0C7V6 817 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TRIM49P0CI25 452 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TRIM49CP0CI26 452 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 FCGR2AP12318 317 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 MAKP20794 623 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PCSK6P29122 969 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 HOXD3P31249 432 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 PYCR1P32322 319 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 RPL4P36578 427 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 RPS19P39019 145 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 AVPR1BP47901 424 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SULT1E1P49888 294 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 AKR1D1P51857 326 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SP2Q02086 613 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PRB3Q04118 309 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 PAX8Q06710 450 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 MZT1Q08AG7 82 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ACKR1Q16570 336 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 EFHC1Q5JVL4 640 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 C10orf120Q5SQS8 335 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SFMBT2Q5VUG0 894 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 LIPKQ5VXJ0 399 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 C9orf57Q5W0N0 161 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 KIAA0895LQ68EN5 471 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 DGAT2L7PQ6IED9 249 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SLC8B1Q6J4K2 584 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 CAPN13Q6MZZ7 669 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 GBP6Q6ZN66 633 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SPATC1Q76KD6 591 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TCEAL8Q8IYN2 117 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SLC38A6Q8IZM9 456 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TAB3Q8N5C8 712 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 DRAXINQ8NBI3 349 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 OR9K2Q8NGE7 335 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ZNF502Q8TBZ5 544 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 KLHL6Q8WZ60 621 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 GTF2H4Q92759 462 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 RAD51AP1Q96B01 352 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TRMT61AQ96FX7 289 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 ST6GAL2Q96JF0 529 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TSNARE1Q96NA8 513 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 OR2M2Q96R28 347 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 STRBPQ96SI9 672 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 OLFM1Q99784 485 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 RIOK2Q9BVS4 552 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 VPS37BQ9H9H4 285 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 FKRPQ9H9S5 495 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 FBRSQ9HAH7 460 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SDF2L1Q9HCN8 221 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 EQTNQ9NQ60 294 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SLC6A13Q9NSD5 602 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 MTCH1Q9NZJ7 389 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 STEAP1Q9UHE8 339 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms