RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 MANSC1Q9H8J5 431 aa16.78■□□□□ 0.28
PRKCB-209ENST00000498058 SLC35C2Q9NQQ7 365 aa16.78■□□□□ 0.28
PRKCB-209ENST00000498058 NMRK1Q9NWW6 199 aa16.78■□□□□ 0.28
PRKCB-209ENST00000498058 HCRTR2O43614 444 aa16.77■□□□□ 0.28
PRKCB-209ENST00000498058 ULK1O75385 1050 aa16.77■□□□□ 0.28
PRKCB-209ENST00000498058 BGNP21810 368 aa16.77■□□□□ 0.28
PRKCB-209ENST00000498058 TIA1P31483 386 aaKnown RBP eCLIP16.77■□□□□ 0.285e-6■□□□□ 8.7
PRKCB-209ENST00000498058 FOXA1P55317 472 aa16.77■□□□□ 0.28
PRKCB-209ENST00000498058 PKNOX1P55347 436 aa16.77■□□□□ 0.28
PRKCB-209ENST00000498058 PSG6Q00889 435 aa16.77■□□□□ 0.28
PRKCB-209ENST00000498058 STX3Q13277 289 aa16.77■□□□□ 0.28
PRKCB-209ENST00000498058 FBXW10Q5XX13 1052 aa16.77■□□□□ 0.28
PRKCB-209ENST00000498058 CAMKMTQ7Z624 323 aa16.77■□□□□ 0.28
PRKCB-209ENST00000498058 SLC44A2Q8IWA5 706 aaPredicted RBP16.77■□□□□ 0.28
PRKCB-209ENST00000498058 SFXN2Q96NB2 322 aa16.77■□□□□ 0.28
PRKCB-209ENST00000498058 GSTO2Q9H4Y5 243 aa16.77■□□□□ 0.28
PRKCB-209ENST00000498058 GNG14A0A1W2PPG7 69 aa16.76■□□□□ 0.27
PRKCB-209ENST00000498058 SH3D21A4FU49 640 aa16.76■□□□□ 0.27
PRKCB-209ENST00000498058 A8MXE2 369 aa16.76■□□□□ 0.27
PRKCB-209ENST00000498058 H0YC42 278 aa16.76■□□□□ 0.27
PRKCB-209ENST00000498058 UBFD1O14562 309 aaKnown RBP16.76■□□□□ 0.27
PRKCB-209ENST00000498058 KLF11O14901 512 aa16.76■□□□□ 0.27
PRKCB-209ENST00000498058 SIAH2O43255 324 aa16.76■□□□□ 0.27
PRKCB-209ENST00000498058 PLOD3O60568 738 aa16.76■□□□□ 0.27
PRKCB-209ENST00000498058 BCAS2O75934 225 aaPredicted RBP16.76■□□□□ 0.27
PRKCB-209ENST00000498058 CD53P19397 219 aa16.76■□□□□ 0.27
PRKCB-209ENST00000498058 HMOX2P30519 316 aa16.76■□□□□ 0.27
PRKCB-209ENST00000498058 PNLIPRP2P54317 469 aa16.76■□□□□ 0.27
PRKCB-209ENST00000498058 TPD52P55327 224 aaPredicted RBP16.76■□□□□ 0.27
PRKCB-209ENST00000498058 GALNT18Q6P9A2 607 aa16.76■□□□□ 0.27
PRKCB-209ENST00000498058 ZCCHC23Q6ZST2 131 aa16.76■□□□□ 0.27
PRKCB-209ENST00000498058 ERP27Q96DN0 273 aa16.76■□□□□ 0.27
PRKCB-209ENST00000498058 MAGEB18Q96M61 343 aa16.76■□□□□ 0.27
PRKCB-209ENST00000498058 ZFP3Q96NJ6 502 aa16.76■□□□□ 0.27
PRKCB-209ENST00000498058 DACH2Q96NX9 599 aa16.76■□□□□ 0.27
PRKCB-209ENST00000498058 SMR3AQ99954 134 aa16.76■□□□□ 0.27
PRKCB-209ENST00000498058 YIPF4Q9BSR8 244 aa16.76■□□□□ 0.27
PRKCB-209ENST00000498058 MRPS18CQ9Y3D5 142 aaKnown RBP16.76■□□□□ 0.27
PRKCB-209ENST00000498058 A0A1W2PNV4 684 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 MYO1GB0I1T2 1018 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 SCO2O43819 266 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 ABCB7O75027 752 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 CRCPO75575 148 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 HSPA4LO95757 839 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 CHMP24386 653 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 DPP4P27487 766 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 HOXC12P31275 282 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 GCKP35557 465 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 SUCLG1P53597 346 aaKnown RBP16.75■□□□□ 0.27
PRKCB-209ENST00000498058 ABCE1P61221 599 aaKnown RBP16.75■□□□□ 0.27
PRKCB-209ENST00000498058 ACSM2AQ08AH3 577 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 KEAP1Q14145 624 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 EFR3AQ14156 821 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 ACSM2BQ68CK6 577 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 VWA1Q6PCB0 445 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 MTERF4Q7Z6M4 381 aaKnown RBP16.75■□□□□ 0.27
PRKCB-209ENST00000498058 GRAMD2AQ8IUY3 354 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 FAM9CQ8IZT9 166 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 GBP7Q8N8V2 638 aaPredicted RBP16.75■□□□□ 0.27
PRKCB-209ENST00000498058 FADS6Q8N9I5 356 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 OR2M3Q8NG83 312 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 OR6Y1Q8NGX8 325 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.75■□□□□ 0.27
PRKCB-209ENST00000498058 CKAP2Q8WWK9 683 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 ZNF75CPQ92670 426 aaPredicted RBP16.75■□□□□ 0.27
PRKCB-209ENST00000498058 DSN1Q9H410 356 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 TNFRSF12AQ9NP84 129 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 THAP1Q9NVV9 213 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 FAM53CQ9NYF3 392 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 DKKL1Q9UK85 242 aa16.75■□□□□ 0.27
PRKCB-209ENST00000498058 SERTM1A2A2V5 107 aa16.74■□□□□ 0.27
PRKCB-209ENST00000498058 FADS1O60427 444 aa16.74■□□□□ 0.27
PRKCB-209ENST00000498058 ENO1P06733 434 aaKnown RBP16.74■□□□□ 0.27
PRKCB-209ENST00000498058 IL12BP29460 328 aa16.74■□□□□ 0.27
PRKCB-209ENST00000498058 MC3RP41968 323 aa16.74■□□□□ 0.27
PRKCB-209ENST00000498058 CPA2P48052 419 aa16.74■□□□□ 0.27
PRKCB-209ENST00000498058 SLC1A6P48664 564 aa16.74■□□□□ 0.27
PRKCB-209ENST00000498058 FAM27E3Q08E93 113 aa16.74■□□□□ 0.27
PRKCB-209ENST00000498058 SPIN4Q56A73 249 aa16.74■□□□□ 0.27
PRKCB-209ENST00000498058 AAGABQ6PD74 315 aa16.74■□□□□ 0.27
PRKCB-209ENST00000498058 OR5M1Q8NGP8 315 aa16.74■□□□□ 0.27
PRKCB-209ENST00000498058 FIG4Q92562 907 aa16.74■□□□□ 0.27
PRKCB-209ENST00000498058 STARD4Q96DR4 205 aa16.74■□□□□ 0.27
PRKCB-209ENST00000498058 PIGMQ9H3S5 423 aa16.74■□□□□ 0.27
PRKCB-209ENST00000498058 MID1IP1Q9NPA3 183 aa16.74■□□□□ 0.27
PRKCB-209ENST00000498058 SIRT5Q9NXA8 310 aa16.74■□□□□ 0.27
PRKCB-209ENST00000498058 MED11Q9P086 117 aa16.74■□□□□ 0.27
PRKCB-209ENST00000498058 EDARQ9UNE0 448 aa16.74■□□□□ 0.27
PRKCB-209ENST00000498058 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.74■□□□□ 0.27
PRKCB-209ENST00000498058 TESMINQ9Y4I5 508 aa16.74■□□□□ 0.27
PRKCB-209ENST00000498058 JUNP05412 331 aaKnown RBP16.73■□□□□ 0.27
PRKCB-209ENST00000498058 ANXA4P09525 319 aaPredicted RBP16.73■□□□□ 0.27
PRKCB-209ENST00000498058 DDCP20711 480 aa16.73■□□□□ 0.27
PRKCB-209ENST00000498058 EVI2BP34910 448 aa16.73■□□□□ 0.27
PRKCB-209ENST00000498058 MDH1P40925 334 aaKnown RBP16.73■□□□□ 0.27
PRKCB-209ENST00000498058 C2orf80Q0P641 193 aa16.73■□□□□ 0.27
PRKCB-209ENST00000498058 BST1Q10588 318 aa16.73■□□□□ 0.27
PRKCB-209ENST00000498058 ZNF155Q12901 538 aaPredicted RBP16.73■□□□□ 0.27
PRKCB-209ENST00000498058 GAB1Q13480 694 aa16.73■□□□□ 0.27
PRKCB-209ENST00000498058 HEPACAMQ14CZ8 416 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms