RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 DPYSQ14117 519 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 ELAVL3Q14576 367 aaKnown RBP2.2□□□□□ -2.06
SMC4-227ENST00000497984 FRA10AC1Q70Z53 315 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 TRPM8Q7Z2W7 1104 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 IQCA1Q86XH1 822 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 CENPSQ8N2Z9 138 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 SFRP1Q8N474 314 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 WDR36Q8NI36 951 aaKnown RBP2.2□□□□□ -2.06
SMC4-227ENST00000497984 PHYHIPQ92561 330 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 FGGYQ96C11 551 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 DHTKD1Q96HY7 919 aaPredicted RBP2.2□□□□□ -2.06
SMC4-227ENST00000497984 ZNF560Q96MR9 790 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 IL4I1Q96RQ9 567 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 NICN1Q9BSH3 213 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 CNPY3Q9BT09 278 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 WRAP53Q9BUR4 548 aaKnown RBP2.2□□□□□ -2.06
SMC4-227ENST00000497984 NACA2Q9H009 215 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 DDX47Q9H0S4 455 aaKnown RBP2.2□□□□□ -2.06
SMC4-227ENST00000497984 MID1IP1Q9NPA3 183 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 PNO1Q9NRX1 252 aaKnown RBP2.2□□□□□ -2.06
SMC4-227ENST00000497984 CYP39A1Q9NYL5 469 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 ZNF221Q9UK13 617 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 NEU3Q9UQ49 428 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 L3MBTL1Q9Y468 752 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 TMEM89A2RUT3 159 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 DHRS7CA6NNS2 312 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 K7ENP7 123 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 KINO60870 393 aaKnown RBP2.19□□□□□ -2.06
SMC4-227ENST00000497984 MMP23AO75900 390 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 NDUFA7O95182 113 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 CXCL10P02778 98 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 GABRR1P24046 479 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 PTBP1P26599 531 aaKnown RBP eCLIP2.19□□□□□ -2.06
SMC4-227ENST00000497984 CDH5P33151 784 aaPredicted RBP2.19□□□□□ -2.06
SMC4-227ENST00000497984 RND3P61587 244 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 MRPS6P82932 125 aaKnown RBP2.19□□□□□ -2.06
SMC4-227ENST00000497984 SRYQ05066 204 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 BCL2L1Q07817 233 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 KCNJ11Q14654 390 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 AGKQ53H12 422 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 TEX44Q53QW1 395 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 BEND6Q5SZJ8 279 aaPredicted RBP2.19□□□□□ -2.06
SMC4-227ENST00000497984 IL23RQ5VWK5 629 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 SULT1C3Q6IMI6 304 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 FAM159AQ6UWV7 190 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 CXCL17Q6UXB2 119 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 STAC2Q6ZMT1 411 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 Q7L0L9 218 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 P4HA3Q7Z4N8 544 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 TMEM185AQ8NFB2 350 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 OR10H4Q8NGA5 316 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 TBX15Q96SF7 602 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 COQ7Q99807 217 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 CCSER1Q9C0I3 900 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 NANOGQ9H9S0 305 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 RBM28Q9NW13 759 aaKnown RBP2.19□□□□□ -2.06
SMC4-227ENST00000497984 ONECUT1Q9UBC0 465 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 GHRLQ9UBU3 117 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 BCAP29Q9UHQ4 241 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 RAB26Q9ULW5 256 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 SMC3Q9UQE7 1217 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 TDRKHQ9Y2W6 561 aaKnown RBP2.19□□□□□ -2.06
SMC4-227ENST00000497984 PPIAL4AQ9Y536 164 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 TEX264Q9Y6I9 313 aa2.19□□□□□ -2.06
SMC4-227ENST00000497984 DHX29Q7Z478 1369 aaKnown RBP2.19□□□□□ -2.06
SMC4-227ENST00000497984 IGHV7-81A0A0B4J1V7 117 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 A0A0U1RRA0 63 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 E9PLD3 99 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 E9PMD0 336 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 SGK494L7N484 410 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 IMPA2O14732 288 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 ALOX15BO15296 676 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 MAGEB4O15481 346 aaPredicted RBP2.18□□□□□ -2.06
SMC4-227ENST00000497984 TBL1XO60907 577 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 CYP11B1P15538 503 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 FUT3P21217 361 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 HOXD10P28358 340 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 SRP54P61011 504 aaKnown RBP2.18□□□□□ -2.06
SMC4-227ENST00000497984 MYBPC1Q00872 1141 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 C17orf67Q0P5P2 114 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 RPA4Q13156 261 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 BTG3Q14201 252 aaPredicted RBP2.18□□□□□ -2.06
SMC4-227ENST00000497984 SHHQ15465 462 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 MPPED2Q15777 294 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 AGBL2Q5U5Z8 902 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 LIPKQ5VXJ0 399 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 PNCKQ6P2M8 343 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 ZNF562Q6V9R5 426 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 HSD17B13Q7Z5P4 300 aaPredicted RBP2.18□□□□□ -2.06
SMC4-227ENST00000497984 IFNEQ86WN2 208 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 CNTN4Q8IWV2 1026 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 CCDC71LQ8N9Z2 235 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 ANKRD49Q8WVL7 239 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 SRSF12Q8WXF0 261 aaKnown RBP2.18□□□□□ -2.06
SMC4-227ENST00000497984 NEIL2Q969S2 332 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 SLC25A36Q96CQ1 311 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 APPL1Q9UKG1 709 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 DUSP12Q9UNI6 340 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 SAMD4AQ9UPU9 718 aaKnown RBP2.18□□□□□ -2.06
SMC4-227ENST00000497984 EIF3LQ9Y262 564 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms