RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 MTAPQ13126 283 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 GSG1Q2KHT4 349 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 MPEG1Q2M385 716 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 ZXDCQ2QGD7 858 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 C3orf38Q5JPI3 329 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 HIST2H2AA3Q6FI13 130 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 SFXN4Q6P4A7 337 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 TRMT11Q7Z4G4 463 aaKnown RBP9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 TMED4Q7Z7H5 227 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 CYB561A3Q8NBI2 242 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 GPR26Q8NDV2 337 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 ZNF740Q8NDX6 193 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 DOK4Q8TEW6 326 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 ACOT12Q8WYK0 555 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 MARVELD3Q96A59 401 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 ZC3HAV1LQ96H79 300 aaKnown RBP9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 ZNF607Q96SK3 696 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 TREM1Q9NP99 234 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 CA10Q9NS85 328 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 DUX4Q9UBX2 424 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 LIPT1Q9Y234 373 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 COL11A1P12107 1806 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 LOC100509620A0A075B734 347 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 MEIKINA0A087WXM9 373 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 WASH4PA8MWX3 477 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 PSMD9O00233 223 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 EFCAB14O75071 495 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 CSN2P05814 226 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 ADRB1P08588 477 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 CBSLP0DN79 551 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 ACHEP22303 614 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 NOS3P29474 1203 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 PPP2R1BP30154 601 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 CBSP35520 551 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 ATP5C1P36542 298 aaKnown RBP9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 LIMK1P53667 647 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 SORDQ00796 357 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 ZNF763Q0D2J5 394 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 TPBGQ13641 420 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 DUSP28Q4G0W2 176 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 C4orf46Q504U0 113 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 RAB12Q6IQ22 244 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 METAP1DQ6UB28 335 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 CXCL17Q6UXB2 119 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 GPC2Q8N158 579 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 C2orf69Q8N8R5 385 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 HSD17B8Q92506 261 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 FBXO17Q96EF6 278 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 OR1F2PQ96R84 312 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 PDCD10Q9BUL8 212 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 SLC25A18Q9H1K4 315 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 TMEM231Q9H6L2 316 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 LDAHQ9H6V9 325 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 SLC6A20Q9NP91 592 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 NTMQ9P121 344 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 PLXNA1Q9UIW2 1896 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 TMEM229AB2RXF0 380 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 GOSR2O14653 212 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 SNAI1O95863 264 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 SLC16A8O95907 504 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 ZNF35P13682 527 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 GK2Q14410 553 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 GSG1LQ6UXU4 331 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 IKBIPQ70UQ0 350 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 FAM181AQ8N9Y4 354 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 OR8S1Q8NH09 359 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 GPA33Q99795 319 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 MICU1Q9BPX6 476 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 C7orf50Q9BRJ6 194 aaKnown RBP9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 PELOQ9BRX2 385 aaKnown RBP9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 NKX6-2Q9C056 277 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 MFFQ9GZY8 342 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 ABCG4Q9H172 646 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 C14orf105Q9NVL8 296 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 ASF1BQ9NVP2 202 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 DYRK1BQ9Y463 629 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 STON1Q9Y6Q2 735 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 MTMR11A4FU01 709 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 ZNF705EA8MWA4 302 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 TNFRSF10BO14763 440 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 PTP4A3O75365 173 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 RGS9O75916 674 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 FARS2O95363 451 aaKnown RBP9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 APOC1P02654 83 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 SYN1P17600 705 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 S100A11P31949 105 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 POLR2GP62487 172 aaKnown RBP eCLIP9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 MED27Q6P2C8 311 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 OR56B4Q8NH76 319 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 LRIG1Q96JA1 1093 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 ZNF285Q96NJ3 590 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 IFT27Q9BW83 186 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 SLC6A16Q9GZN6 736 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 BTBD1Q9H0C5 482 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 ZDHHC6Q9H6R6 413 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 CXorf36Q9H7Y0 433 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 C1GALT1Q9NS00 363 aa9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 ZCCHC3Q9NUD5 404 aaKnown RBP9.98□□□□□ -0.81
TRAPPC12-223ENST00000497597 CA12O43570 354 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 CREBL2O60519 120 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms