RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 CAMK4Q16566 473 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 TATDN3Q17R31 274 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 CCDC57Q2TAC2 916 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 SLC36A3Q495N2 470 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 OLFML2AQ68BL7 652 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 ASPHD2Q6ICH7 369 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 SULT1C3Q6IMI6 304 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 SLC25A24Q6NUK1 477 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 REG3GQ6UW15 175 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 ZNF600Q6ZNG1 722 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 PARGQ86W56 976 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 GMCL1P1Q8NEA9 526 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 OR6T1Q8NGN1 323 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 FAM222BQ8WU58 562 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 RAB7BQ96AH8 199 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 PIWIL1Q96J94 861 aaKnown RBP3.15□□□□□ -1.91
SMC4-225ENST00000497203 VPS39Q96JC1 886 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 MCCC1Q96RQ3 725 aaPredicted RBP3.15□□□□□ -1.91
SMC4-225ENST00000497203 TESK2Q96S53 571 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 SLC25A51Q9H1U9 297 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 DHX33Q9H6R0 707 aaKnown RBP3.15□□□□□ -1.91
SMC4-225ENST00000497203 GPN2Q9H9Y4 310 aaPredicted RBP3.15□□□□□ -1.91
SMC4-225ENST00000497203 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.15□□□□□ -1.91
SMC4-225ENST00000497203 CUTCQ9NTM9 273 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 RBM28Q9NW13 759 aaKnown RBP3.15□□□□□ -1.91
SMC4-225ENST00000497203 ELOVL2Q9NXB9 296 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 CLEC5AQ9NY25 188 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 CGNQ9P2M7 1197 aaKnown RBP3.15□□□□□ -1.91
SMC4-225ENST00000497203 CYTH4Q9UIA0 394 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 CRLS1Q9UJA2 301 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 A8MUI8 341 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 DUX1O43812 170 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 TRIM3O75382 744 aaPredicted RBP3.14□□□□□ -1.91
SMC4-225ENST00000497203 JCHAINP01591 159 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 ACADSP16219 412 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 DLSTP36957 453 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 POU3F4P49335 361 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 FNTAP49354 379 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 HSD17B7P56937 341 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 SLC1A5Q15758 541 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 LINC01620Q4KN68 170 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 NCR3LG1Q68D85 454 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 GALNT17Q6IS24 598 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 PRSS48Q7RTY5 328 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 HSD11B1LQ7Z5J1 315 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 ANKRD37Q7Z713 158 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 SERINC5Q86VE9 423 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 IFNEQ86WN2 208 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.14□□□□□ -1.91
SMC4-225ENST00000497203 ZSCAN4Q8NAM6 433 aaPredicted RBP3.14□□□□□ -1.91
SMC4-225ENST00000497203 ZNF671Q8TAW3 534 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 VN1R17PQ8TDU5 208 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 AGAP11Q8TF27 550 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 SDSLQ96GA7 329 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 C1orf147Q96MC9 270 aaPredicted RBP3.14□□□□□ -1.91
SMC4-225ENST00000497203 APOL2Q9BQE5 337 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 PYGO2Q9BRQ0 406 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 HCAR1Q9BXC0 346 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 OPN3Q9H1Y3 402 aaPredicted RBP3.14□□□□□ -1.91
SMC4-225ENST00000497203 AATFQ9NY61 560 aaKnown RBP eCLIP3.14□□□□□ -1.91
SMC4-225ENST00000497203 EHFQ9NZC4 300 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 ARMCX1Q9P291 453 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 PRODH2Q9UF12 536 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 SPACA6W5XKT8 324 aa3.14□□□□□ -1.91
SMC4-225ENST00000497203 COL2A1P02458 1487 aaPredicted RBP3.14□□□□□ -1.91
SMC4-225ENST00000497203 USP6P35125 1406 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 TRAV9-2A0A087WT02 112 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 A0A1B0GVY2 172 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 EFCAB7A8K855 629 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 G3V3Y1 287 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 GPRIN2O60269 458 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 SRPX2O60687 465 aaPredicted RBP3.13□□□□□ -1.91
SMC4-225ENST00000497203 TBX19O60806 448 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 RHBDL1O75783 438 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 GJB5O95377 273 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 IGHG3P01860 377 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 CT45A10P0DMU9 189 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 FOLR2P14207 255 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 GATA1P15976 413 aaPredicted RBP3.13□□□□□ -1.91
SMC4-225ENST00000497203 PSMA5P28066 241 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 OTX2P32243 289 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 HMGCLP35914 325 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 ACVR1BP36896 505 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 PRPHP41219 470 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 DSCR10P59022 87 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 NTHL1P78549 312 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 BDH1Q02338 343 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 PLOD1Q02809 727 aaPredicted RBP3.13□□□□□ -1.91
SMC4-225ENST00000497203 PUDPQ08623 228 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 COX10Q12887 443 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 IL18R1Q13478 541 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 SLC10A1Q14973 349 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 LTB4RQ15722 352 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 CYP51A1Q16850 503 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 ARMCX2Q7L311 632 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 IL1F10Q8WWZ1 152 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 MYLPFQ96A32 169 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 TRIM44Q96DX7 344 aaPredicted RBP3.13□□□□□ -1.91
SMC4-225ENST00000497203 DHTKD1Q96HY7 919 aaPredicted RBP3.13□□□□□ -1.91
SMC4-225ENST00000497203 MRPL39Q9NYK5 338 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms