RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 CMPK2Q5EBM0 449 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 SLC30A6Q6NXT4 461 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 APOOLQ6UXV4 268 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 MARCH3Q86UD3 253 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 PACS2Q86VP3 889 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 MSRB3Q8IXL7 192 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 RNF138Q8WVD3 245 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 XAGE5Q8WWM1 108 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 ZNF597Q96LX8 424 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 GNRHR2Q96P88 292 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 PHF12Q96QT6 1004 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 NMUR2Q9GZQ4 415 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 BOKQ9UMX3 212 aaPredicted RBP17.77■□□□□ 0.44
HDAC4-212ENST00000495497 EXPH5Q8NEV8 1989 aa17.77■□□□□ 0.43
HDAC4-212ENST00000495497 SHANK1Q9Y566 2161 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 A0A096LPI6 279 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 J3QKU1 62 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 ACOT7O00154 380 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 HMGN4O00479 90 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 ADAM10O14672 748 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 CDC40O60508 579 aaKnown RBP eCLIP17.76■□□□□ 0.43
HDAC4-212ENST00000495497 UNC5CO95185 931 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 SNRPB2P08579 225 aaKnown RBP17.76■□□□□ 0.43
HDAC4-212ENST00000495497 KHKP50053 298 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 RNF144AP50876 292 aaPredicted RBP17.76■□□□□ 0.43
HDAC4-212ENST00000495497 GAS1P54826 345 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 SNTA1Q13424 505 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.76■□□□□ 0.43
HDAC4-212ENST00000495497 OR5M10Q6IEU7 315 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 RETREG3Q86VR2 466 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 SLC22A16Q86VW1 577 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 ATCAYQ86WG3 371 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 GALNT11Q8NCW6 608 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 ST6GALNAC3Q8NDV1 305 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 OR4C3Q8NH37 302 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 TMEM41AQ96HV5 264 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 GPR137Q96N19 417 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 G6PC3Q9BUM1 346 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 NSRP1Q9H0G5 558 aaKnown RBP17.76■□□□□ 0.43
HDAC4-212ENST00000495497 TPT1P8Q9HAU6 139 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 SLC25A37Q9NYZ2 338 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 ARMCX1Q9P291 453 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 SEC14L3Q9UDX4 400 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 NDUFAF1Q9Y375 327 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 PCDHGB3Q9Y5G1 929 aa17.76■□□□□ 0.43
HDAC4-212ENST00000495497 PRAMEF27A3QJZ7 478 aa17.75■□□□□ 0.43
HDAC4-212ENST00000495497 ANKUB1A6NFN9 424 aa17.75■□□□□ 0.43
HDAC4-212ENST00000495497 DUXAA6NLW8 204 aa17.75■□□□□ 0.43
HDAC4-212ENST00000495497 B4DXG7 233 aa17.75■□□□□ 0.43
HDAC4-212ENST00000495497 SNPHO15079 494 aa17.75■□□□□ 0.43
HDAC4-212ENST00000495497 ASNA1O43681 348 aa17.75■□□□□ 0.43
HDAC4-212ENST00000495497 SNX3O60493 162 aa17.75■□□□□ 0.43
HDAC4-212ENST00000495497 KRT75O95678 551 aa17.75■□□□□ 0.43
HDAC4-212ENST00000495497 MVDP53602 400 aa17.75■□□□□ 0.43
HDAC4-212ENST00000495497 STX5Q13190 355 aa17.75■□□□□ 0.43
HDAC4-212ENST00000495497 HYAL4Q2M3T9 481 aa17.75■□□□□ 0.43
HDAC4-212ENST00000495497 LRIF1Q5T3J3 769 aa17.75■□□□□ 0.43
HDAC4-212ENST00000495497 GFRALQ6UXV0 394 aa17.75■□□□□ 0.43
HDAC4-212ENST00000495497 WDSUB1Q8N9V3 476 aa17.75■□□□□ 0.43
HDAC4-212ENST00000495497 CHDHQ8NE62 594 aaPredicted RBP17.75■□□□□ 0.43
HDAC4-212ENST00000495497 OR1J4Q8NGS1 313 aa17.75■□□□□ 0.43
HDAC4-212ENST00000495497 SDF2Q99470 211 aa17.75■□□□□ 0.43
HDAC4-212ENST00000495497 ZNF703Q9H7S9 590 aaPredicted RBP17.75■□□□□ 0.43
HDAC4-212ENST00000495497 LEF1Q9UJU2 399 aaPredicted RBP17.75■□□□□ 0.43
HDAC4-212ENST00000495497 WIF1Q9Y5W5 379 aa17.75■□□□□ 0.43
HDAC4-212ENST00000495497 LIPGQ9Y5X9 500 aa17.75■□□□□ 0.43
HDAC4-212ENST00000495497 ANGPT2O15123 496 aa17.74■□□□□ 0.43
HDAC4-212ENST00000495497 FCMRO60667 390 aa17.74■□□□□ 0.43
HDAC4-212ENST00000495497 ZIC2O95409 532 aaPredicted RBP17.74■□□□□ 0.43
HDAC4-212ENST00000495497 OXSR1O95747 527 aaPredicted RBP17.74■□□□□ 0.43
HDAC4-212ENST00000495497 ETFAP13804 333 aa17.74■□□□□ 0.43
HDAC4-212ENST00000495497 ATP6V1C1P21283 382 aa17.74■□□□□ 0.43
HDAC4-212ENST00000495497 CRATP43155 626 aa17.74■□□□□ 0.43
HDAC4-212ENST00000495497 FUT5Q11128 374 aa17.74■□□□□ 0.43
HDAC4-212ENST00000495497 EIF2S3LQ2VIR3 472 aaKnown RBP17.74■□□□□ 0.43
HDAC4-212ENST00000495497 ARHGAP11BQ3KRB8 267 aa17.74■□□□□ 0.43
HDAC4-212ENST00000495497 TIGD3Q6B0B8 471 aa17.74■□□□□ 0.43
HDAC4-212ENST00000495497 C16orf62Q7Z3J2 963 aa17.74■□□□□ 0.43
HDAC4-212ENST00000495497 FAM109AQ8N4B1 249 aa17.74■□□□□ 0.43
HDAC4-212ENST00000495497 GATSQ8NAP1 163 aa17.74■□□□□ 0.43
HDAC4-212ENST00000495497 ZDHHC11Q9H8X9 412 aa17.74■□□□□ 0.43
HDAC4-212ENST00000495497 EXD2Q9NVH0 621 aa17.74■□□□□ 0.43
HDAC4-212ENST00000495497 VAPAQ9P0L0 249 aa17.74■□□□□ 0.43
HDAC4-212ENST00000495497 C15orf41Q9Y2V0 281 aa17.74■□□□□ 0.43
HDAC4-212ENST00000495497 PRRC2CQ9Y520 2896 aaKnown RBP17.73■□□□□ 0.43
HDAC4-212ENST00000495497 LOC100653049A0A140TA62 436 aa17.73■□□□□ 0.43
HDAC4-212ENST00000495497 CLIC1O00299 241 aa17.73■□□□□ 0.43
HDAC4-212ENST00000495497 FBP2O00757 339 aa17.73■□□□□ 0.43
HDAC4-212ENST00000495497 KRT34O76011 436 aa17.73■□□□□ 0.43
HDAC4-212ENST00000495497 SOX30O94993 753 aa17.73■□□□□ 0.43
HDAC4-212ENST00000495497 TBXA2RP21731 343 aa17.73■□□□□ 0.43
HDAC4-212ENST00000495497 GDF1P27539 372 aa17.73■□□□□ 0.43
HDAC4-212ENST00000495497 GPR68Q15743 365 aa17.73■□□□□ 0.43
HDAC4-212ENST00000495497 SYPL1Q16563 259 aa17.73■□□□□ 0.43
HDAC4-212ENST00000495497 FLYWCH1Q4VC44 716 aa17.73■□□□□ 0.43
HDAC4-212ENST00000495497 KRTCAP3Q53RY4 240 aa17.73■□□□□ 0.43
HDAC4-212ENST00000495497 HEPHL1Q6MZM0 1159 aa17.73■□□□□ 0.43
HDAC4-212ENST00000495497 DLEU7Q6UYE1 221 aa17.73■□□□□ 0.43
HDAC4-212ENST00000495497 MTDHQ86UE4 582 aaKnown RBP17.73■□□□□ 0.43
HDAC4-212ENST00000495497 ANKFN1Q8N957 763 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms