RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 TAS2R7Q9NYW3 318 aa19.91■□□□□ 0.78
HDDC3-203ENST00000494993 OR2M5A3KFT3 312 aa19.9■□□□□ 0.78
HDDC3-203ENST00000494993 DEFB108AA8MXU0 73 aa19.9■□□□□ 0.78
HDDC3-203ENST00000494993 UPK1AO00322 258 aa19.9■□□□□ 0.78
HDDC3-203ENST00000494993 UBFD1O14562 309 aaKnown RBP19.9■□□□□ 0.78
HDDC3-203ENST00000494993 SEC14L5O43304 696 aa19.9■□□□□ 0.78
HDDC3-203ENST00000494993 NTSP30990 170 aa19.9■□□□□ 0.78
HDDC3-203ENST00000494993 IMPG1Q17R60 797 aa19.9■□□□□ 0.78
HDDC3-203ENST00000494993 TRMT10CQ7L0Y3 403 aaKnown RBP19.9■□□□□ 0.78
HDDC3-203ENST00000494993 OR2L13Q8N349 312 aa19.9■□□□□ 0.78
HDDC3-203ENST00000494993 CCNYL1Q8N7R7 359 aa19.9■□□□□ 0.78
HDDC3-203ENST00000494993 ZNF592Q92610 1267 aa19.9■□□□□ 0.78
HDDC3-203ENST00000494993 C1GALT1C1Q96EU7 318 aa19.9■□□□□ 0.78
HDDC3-203ENST00000494993 ZNF845Q96IR2 970 aaPredicted RBP19.9■□□□□ 0.78
HDDC3-203ENST00000494993 DDX18Q9NVP1 670 aaKnown RBP19.9■□□□□ 0.78
HDDC3-203ENST00000494993 ELOVL5Q9NYP7 299 aa19.9■□□□□ 0.78
HDDC3-203ENST00000494993 ZNF175Q9Y473 711 aa19.9■□□□□ 0.78
HDDC3-203ENST00000494993 POLR3HQ9Y535 204 aaPredicted RBP19.9■□□□□ 0.78
HDDC3-203ENST00000494993 H3BML4 177 aa19.89■□□□□ 0.77
HDDC3-203ENST00000494993 RIPK2O43353 540 aa19.89■□□□□ 0.77
HDDC3-203ENST00000494993 EMC8O43402 210 aa19.89■□□□□ 0.77
HDDC3-203ENST00000494993 IL33O95760 270 aa19.89■□□□□ 0.77
HDDC3-203ENST00000494993 POU2F1P14859 743 aa19.89■□□□□ 0.77
HDDC3-203ENST00000494993 CRYGSP22914 178 aa19.89■□□□□ 0.77
HDDC3-203ENST00000494993 CCKARP32238 428 aa19.89■□□□□ 0.77
HDDC3-203ENST00000494993 CLK3P49761 638 aaKnown RBP19.89■□□□□ 0.77
HDDC3-203ENST00000494993 ZNHIT3Q15649 155 aaPredicted RBP19.89■□□□□ 0.77
HDDC3-203ENST00000494993 Q71RC1 249 aaPredicted RBP19.89■□□□□ 0.77
HDDC3-203ENST00000494993 OR5M1Q8NGP8 315 aa19.89■□□□□ 0.77
HDDC3-203ENST00000494993 FAM76AQ8TAV0 307 aa19.89■□□□□ 0.77
HDDC3-203ENST00000494993 FNDC9Q8TBE3 224 aa19.89■□□□□ 0.77
HDDC3-203ENST00000494993 DUSP19Q8WTR2 217 aa19.89■□□□□ 0.77
HDDC3-203ENST00000494993 ELP4Q96EB1 424 aa19.89■□□□□ 0.77
HDDC3-203ENST00000494993 AMDHD1Q96NU7 426 aa19.89■□□□□ 0.77
HDDC3-203ENST00000494993 PIP5K1AQ99755 562 aa19.89■□□□□ 0.77
HDDC3-203ENST00000494993 PIGQQ9BRB3 760 aa19.89■□□□□ 0.77
HDDC3-203ENST00000494993 SLC39A3Q9BRY0 314 aa19.89■□□□□ 0.77
HDDC3-203ENST00000494993 MED18Q9BUE0 208 aa19.89■□□□□ 0.77
HDDC3-203ENST00000494993 RNF122Q9H9V4 155 aa19.89■□□□□ 0.77
HDDC3-203ENST00000494993 MRTO4Q9UKD2 239 aaKnown RBP19.89■□□□□ 0.77
HDDC3-203ENST00000494993 ROS1P08922 2347 aa19.88■□□□□ 0.77
HDDC3-203ENST00000494993 ARHGEF9O43307 516 aa19.88■□□□□ 0.77
HDDC3-203ENST00000494993 CGAP01215 116 aa19.88■□□□□ 0.77
HDDC3-203ENST00000494993 PYGBP11216 843 aa19.88■□□□□ 0.77
HDDC3-203ENST00000494993 UGT2B10P36537 528 aa19.88■□□□□ 0.77
HDDC3-203ENST00000494993 PSMD4P55036 377 aaKnown RBP19.88■□□□□ 0.77
HDDC3-203ENST00000494993 CLDN20P56880 219 aa19.88■□□□□ 0.77
HDDC3-203ENST00000494993 FGFBP1Q14512 234 aa19.88■□□□□ 0.77
HDDC3-203ENST00000494993 PON3Q15166 354 aa19.88■□□□□ 0.77
HDDC3-203ENST00000494993 GLYR1Q49A26 553 aaPredicted RBP19.88■□□□□ 0.77
HDDC3-203ENST00000494993 MARCH3Q86UD3 253 aa19.88■□□□□ 0.77
HDDC3-203ENST00000494993 P3H2Q8IVL5 708 aa19.88■□□□□ 0.77
HDDC3-203ENST00000494993 LRRC75A-AS1Q8N1F1 130 aa19.88■□□□□ 0.77
HDDC3-203ENST00000494993 PIGTQ969N2 578 aa19.88■□□□□ 0.77
HDDC3-203ENST00000494993 CCDC126Q96EE4 140 aa19.88■□□□□ 0.77
HDDC3-203ENST00000494993 PIK3IP1Q96FE7 263 aa19.88■□□□□ 0.77
HDDC3-203ENST00000494993 LMF2Q9BU23 707 aaKnown RBP19.88■□□□□ 0.77
HDDC3-203ENST00000494993 PSMC3IPQ9P2W1 217 aaPredicted RBP19.88■□□□□ 0.77
HDDC3-203ENST00000494993 EMCNQ9ULC0 261 aa19.88■□□□□ 0.77
HDDC3-203ENST00000494993 WBP11Q9Y2W2 641 aaKnown RBP19.88■□□□□ 0.77
HDDC3-203ENST00000494993 G3V2L1 256 aa19.87■□□□□ 0.77
HDDC3-203ENST00000494993 SMPD2O60906 423 aa19.87■□□□□ 0.77
HDDC3-203ENST00000494993 IFI6P09912 130 aa19.87■□□□□ 0.77
HDDC3-203ENST00000494993 CD8BP10966 210 aa19.87■□□□□ 0.77
HDDC3-203ENST00000494993 RFX3P48380 749 aa19.87■□□□□ 0.77
HDDC3-203ENST00000494993 RPS3AP61247 264 aaKnown RBP19.87■□□□□ 0.77
HDDC3-203ENST00000494993 Q5PR19 223 aa19.87■□□□□ 0.77
HDDC3-203ENST00000494993 CLEC9AQ6UXN8 241 aa19.87■□□□□ 0.77
HDDC3-203ENST00000494993 IKBIPQ70UQ0 350 aa19.87■□□□□ 0.77
HDDC3-203ENST00000494993 TRIM46Q7Z4K8 759 aa19.87■□□□□ 0.77
HDDC3-203ENST00000494993 METTL25Q8N6Q8 603 aa19.87■□□□□ 0.77
HDDC3-203ENST00000494993 MZB1Q8WU39 189 aa19.87■□□□□ 0.77
HDDC3-203ENST00000494993 TBL1XR1Q9BZK7 514 aa19.87■□□□□ 0.77
HDDC3-203ENST00000494993 ZNF395Q9H8N7 513 aaPredicted RBP19.87■□□□□ 0.77
HDDC3-203ENST00000494993 DCDC2Q9UHG0 476 aa19.87■□□□□ 0.77
HDDC3-203ENST00000494993 FN1P02751 2386 aaKnown RBP19.86■□□□□ 0.77
HDDC3-203ENST00000494993 IGLV3-32A0A0A0MS00 114 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 TTC36A6NLP5 189 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 C16orf97H3BN30 126 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 H3BQF6 201 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 RSL1D1O76021 490 aaKnown RBP19.86■□□□□ 0.77
HDDC3-203ENST00000494993 UTS2O95399 124 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 MYL2P10916 166 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 KCNJ5P48544 419 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 NAA20P61599 178 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 OCRLQ01968 901 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 GUSBP1Q15486 140 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 NOXRED1Q6NXP6 359 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 ZYG11AQ6WRX3 759 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 FRMD7Q6ZUT3 714 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 ZNF550Q7Z398 422 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 ZNF610Q8N9Z0 462 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 GFM2Q969S9 779 aaKnown RBP19.86■□□□□ 0.77
HDDC3-203ENST00000494993 UBTD1Q9HAC8 227 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 C3orf14Q9HBI5 128 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 RRAGDQ9NQL2 400 aaPredicted RBP19.86■□□□□ 0.77
HDDC3-203ENST00000494993 TBK1Q9UHD2 729 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 PROCRQ9UNN8 238 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 AP4B1Q9Y6B7 739 aa19.86■□□□□ 0.77
HDDC3-203ENST00000494993 ANGPTL1O95841 491 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms