RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CCNYL1Q8N7R7 359 aa20.95■□□□□ 0.94
COL27A1-208ENST00000494780 PIP5K1AQ99755 562 aa20.95■□□□□ 0.94
COL27A1-208ENST00000494780 PIGQQ9BRB3 760 aa20.95■□□□□ 0.94
COL27A1-208ENST00000494780 SLC39A3Q9BRY0 314 aa20.95■□□□□ 0.94
COL27A1-208ENST00000494780 LMF2Q9BU23 707 aaKnown RBP20.95■□□□□ 0.94
COL27A1-208ENST00000494780 PINK1Q9BXM7 581 aa20.95■□□□□ 0.94
COL27A1-208ENST00000494780 GLIPR2Q9H4G4 154 aa20.95■□□□□ 0.94
COL27A1-208ENST00000494780 DDX18Q9NVP1 670 aaKnown RBP20.95■□□□□ 0.94
COL27A1-208ENST00000494780 FLRT3Q9NZU0 649 aa20.95■□□□□ 0.94
COL27A1-208ENST00000494780 OR2M5A3KFT3 312 aa20.94■□□□□ 0.94
COL27A1-208ENST00000494780 DEFB108AA8MXU0 73 aa20.94■□□□□ 0.94
COL27A1-208ENST00000494780 H3BQF6 201 aa20.94■□□□□ 0.94
COL27A1-208ENST00000494780 ARHGEF9O43307 516 aa20.94■□□□□ 0.94
COL27A1-208ENST00000494780 EMC8O43402 210 aa20.94■□□□□ 0.94
COL27A1-208ENST00000494780 INHBBP09529 407 aa20.94■□□□□ 0.94
COL27A1-208ENST00000494780 IFI6P09912 130 aa20.94■□□□□ 0.94
COL27A1-208ENST00000494780 PYGBP11216 843 aa20.94■□□□□ 0.94
COL27A1-208ENST00000494780 OCRLQ01968 901 aa20.94■□□□□ 0.94
COL27A1-208ENST00000494780 STX5Q13190 355 aa20.94■□□□□ 0.94
COL27A1-208ENST00000494780 TRIM46Q7Z4K8 759 aa20.94■□□□□ 0.94
COL27A1-208ENST00000494780 DUSP19Q8WTR2 217 aa20.94■□□□□ 0.94
COL27A1-208ENST00000494780 ELP4Q96EB1 424 aa20.94■□□□□ 0.94
COL27A1-208ENST00000494780 C1GALT1C1Q96EU7 318 aa20.94■□□□□ 0.94
COL27A1-208ENST00000494780 ZNF845Q96IR2 970 aaPredicted RBP20.94■□□□□ 0.94
COL27A1-208ENST00000494780 AMDHD1Q96NU7 426 aa20.94■□□□□ 0.94
COL27A1-208ENST00000494780 RTN4RQ9BZR6 473 aa20.94■□□□□ 0.94
COL27A1-208ENST00000494780 OPN3Q9H1Y3 402 aaPredicted RBP20.94■□□□□ 0.94
COL27A1-208ENST00000494780 RNF122Q9H9V4 155 aa20.94■□□□□ 0.94
COL27A1-208ENST00000494780 KLHL28Q9NXS3 571 aa20.94■□□□□ 0.94
COL27A1-208ENST00000494780 C6orf203Q9P0P8 240 aaPredicted RBP20.94■□□□□ 0.94
COL27A1-208ENST00000494780 PSMC3IPQ9P2W1 217 aaPredicted RBP20.94■□□□□ 0.94
COL27A1-208ENST00000494780 POLR3HQ9Y535 204 aaPredicted RBP20.94■□□□□ 0.94
COL27A1-208ENST00000494780 ABCA2Q9BZC7 2435 aa20.93■□□□□ 0.94
COL27A1-208ENST00000494780 TTC36A6NLP5 189 aa20.93■□□□□ 0.94
COL27A1-208ENST00000494780 H0YC42 278 aa20.93■□□□□ 0.94
COL27A1-208ENST00000494780 SEC14L5O43304 696 aa20.93■□□□□ 0.94
COL27A1-208ENST00000494780 RSL1D1O76021 490 aaKnown RBP20.93■□□□□ 0.94
COL27A1-208ENST00000494780 CGAP01215 116 aa20.93■□□□□ 0.94
COL27A1-208ENST00000494780 CD8BP10966 210 aa20.93■□□□□ 0.94
COL27A1-208ENST00000494780 POU2F1P14859 743 aa20.93■□□□□ 0.94
COL27A1-208ENST00000494780 CRYGSP22914 178 aa20.93■□□□□ 0.94
COL27A1-208ENST00000494780 ADSLP30566 484 aaPredicted RBP20.93■□□□□ 0.94
COL27A1-208ENST00000494780 UGT2B10P36537 528 aa20.93■□□□□ 0.94
COL27A1-208ENST00000494780 TPD52P55327 224 aaPredicted RBP20.93■□□□□ 0.94
COL27A1-208ENST00000494780 SIRPAP78324 504 aa20.93■□□□□ 0.94
COL27A1-208ENST00000494780 LTBQ06643 244 aa20.93■□□□□ 0.94
COL27A1-208ENST00000494780 IKBIPQ70UQ0 350 aa20.93■□□□□ 0.94
COL27A1-208ENST00000494780 MARCH3Q86UD3 253 aa20.93■□□□□ 0.94
COL27A1-208ENST00000494780 LRRC75A-AS1Q8N1F1 130 aa20.93■□□□□ 0.94
COL27A1-208ENST00000494780 PIGTQ969N2 578 aa20.93■□□□□ 0.94
COL27A1-208ENST00000494780 MED18Q9BUE0 208 aa20.93■□□□□ 0.94
COL27A1-208ENST00000494780 C3orf14Q9HBI5 128 aa20.93■□□□□ 0.94
COL27A1-208ENST00000494780 VPS13CQ709C8 3753 aa20.92■□□□□ 0.94
COL27A1-208ENST00000494780 IGLV3-32A0A0A0MS00 114 aa20.92■□□□□ 0.94
COL27A1-208ENST00000494780 G3V2L1 256 aa20.92■□□□□ 0.94
COL27A1-208ENST00000494780 H3BML4 177 aa20.92■□□□□ 0.94
COL27A1-208ENST00000494780 SIAH2O43255 324 aa20.92■□□□□ 0.94
COL27A1-208ENST00000494780 MYL2P10916 166 aa20.92■□□□□ 0.94
COL27A1-208ENST00000494780 CLDN20P56880 219 aa20.92■□□□□ 0.94
COL27A1-208ENST00000494780 RPS3AP61247 264 aaKnown RBP20.92■□□□□ 0.94
COL27A1-208ENST00000494780 NOXRED1Q6NXP6 359 aa20.92■□□□□ 0.94
COL27A1-208ENST00000494780 ZYG11AQ6WRX3 759 aa20.92■□□□□ 0.94
COL27A1-208ENST00000494780 IFT20Q8IY31 132 aa20.92■□□□□ 0.94
COL27A1-208ENST00000494780 METTL25Q8N6Q8 603 aa20.92■□□□□ 0.94
COL27A1-208ENST00000494780 OR5M1Q8NGP8 315 aa20.92■□□□□ 0.94
COL27A1-208ENST00000494780 FNDC9Q8TBE3 224 aa20.92■□□□□ 0.94
COL27A1-208ENST00000494780 MZB1Q8WU39 189 aa20.92■□□□□ 0.94
COL27A1-208ENST00000494780 SMR3AQ99954 134 aa20.92■□□□□ 0.94
COL27A1-208ENST00000494780 TBL1XR1Q9BZK7 514 aa20.92■□□□□ 0.94
COL27A1-208ENST00000494780 RRAGDQ9NQL2 400 aaPredicted RBP20.92■□□□□ 0.94
COL27A1-208ENST00000494780 EMCNQ9ULC0 261 aa20.92■□□□□ 0.94
COL27A1-208ENST00000494780 AP4B1Q9Y6B7 739 aa20.92■□□□□ 0.94
COL27A1-208ENST00000494780 C16orf97H3BN30 126 aa20.91■□□□□ 0.94
COL27A1-208ENST00000494780 SMPD2O60906 423 aa20.91■□□□□ 0.94
COL27A1-208ENST00000494780 CRCPO75575 148 aa20.91■□□□□ 0.94
COL27A1-208ENST00000494780 UTS2O95399 124 aa20.91■□□□□ 0.94
COL27A1-208ENST00000494780 FPR1P21462 350 aa20.91■□□□□ 0.94
COL27A1-208ENST00000494780 RFX3P48380 749 aa20.91■□□□□ 0.94
COL27A1-208ENST00000494780 C17orf67Q0P5P2 114 aa20.91■□□□□ 0.94
COL27A1-208ENST00000494780 SLC29A2Q14542 456 aa20.91■□□□□ 0.94
COL27A1-208ENST00000494780 PON3Q15166 354 aa20.91■□□□□ 0.94
COL27A1-208ENST00000494780 FRMD7Q6ZUT3 714 aa20.91■□□□□ 0.94
COL27A1-208ENST00000494780 P3H2Q8IVL5 708 aa20.91■□□□□ 0.94
COL27A1-208ENST00000494780 GFM2Q969S9 779 aaKnown RBP20.91■□□□□ 0.94
COL27A1-208ENST00000494780 PIK3IP1Q96FE7 263 aa20.91■□□□□ 0.94
COL27A1-208ENST00000494780 METTL2AQ96IZ6 378 aaKnown RBP20.91■□□□□ 0.94
COL27A1-208ENST00000494780 PROCRQ9UNN8 238 aa20.91■□□□□ 0.94
COL27A1-208ENST00000494780 GLRA3O75311 464 aa20.9■□□□□ 0.94
COL27A1-208ENST00000494780 KCNH1O95259 989 aa20.9■□□□□ 0.94
COL27A1-208ENST00000494780 FCGR2AP12318 317 aa20.9■□□□□ 0.94
COL27A1-208ENST00000494780 CCKARP32238 428 aa20.9■□□□□ 0.94
COL27A1-208ENST00000494780 GABRA3P34903 492 aa20.9■□□□□ 0.94
COL27A1-208ENST00000494780 KCNJ5P48544 419 aa20.9■□□□□ 0.94
COL27A1-208ENST00000494780 PRR5P85299 388 aa20.9■□□□□ 0.94
COL27A1-208ENST00000494780 GUSBP1Q15486 140 aa20.9■□□□□ 0.94
COL27A1-208ENST00000494780 ACKR1Q16570 336 aa20.9■□□□□ 0.94
COL27A1-208ENST00000494780 Q5PR19 223 aa20.9■□□□□ 0.94
COL27A1-208ENST00000494780 CLEC9AQ6UXN8 241 aa20.9■□□□□ 0.94
COL27A1-208ENST00000494780 HHATLQ9HCP6 504 aa20.9■□□□□ 0.94
COL27A1-208ENST00000494780 STOML1Q9UBI4 398 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms