RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 APOOLQ6UXV4 268 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 SZRD1Q7Z422 152 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 P4HA3Q7Z4N8 544 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 TRABD2AQ86V40 505 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 GCNT2Q8N0V5 402 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 OR2L13Q8N349 312 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 OR2M3Q8NG83 312 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 FBXO30Q8TB52 745 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 TCP10LQ8TDR4 215 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 GPR151Q8TDV0 419 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 RNF138Q8WVD3 245 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 SLC9A6Q92581 669 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 OTUB1Q96FW1 271 aaPredicted RBP8.69□□□□□ -1.02
MSH5-218ENST00000494646 C16orf58Q96GQ5 468 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 APOPT1Q96IL0 206 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 METTL2AQ96IZ6 378 aaKnown RBP8.69□□□□□ -1.02
MSH5-218ENST00000494646 YIPF4Q9BSR8 244 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 LMF2Q9BU23 707 aaKnown RBP8.69□□□□□ -1.02
MSH5-218ENST00000494646 G6PC3Q9BUM1 346 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 Q9N2J8 555 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 SDHAF3Q9NRP4 125 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.69□□□□□ -1.02
MSH5-218ENST00000494646 MRPS18CQ9Y3D5 142 aaKnown RBP8.69□□□□□ -1.02
MSH5-218ENST00000494646 ZNF337Q9Y3M9 751 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 DNAJC15Q9Y5T4 150 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 V9GYY5 206 aaPredicted RBP8.69□□□□□ -1.02
MSH5-218ENST00000494646 HEATR5AQ86XA9 2040 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 ANKHD1Q8IWZ3 2542 aaKnown RBP8.68□□□□□ -1.02
MSH5-218ENST00000494646 SHISA8B8ZZ34 492 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 PIP5K1BO14986 540 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 LSM1O15116 133 aaKnown RBP8.68□□□□□ -1.02
MSH5-218ENST00000494646 NPHS1O60500 1241 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 PEX11AO75192 247 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 KCNH1O95259 989 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 UTS2O95399 124 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 PSMG1O95456 288 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 ANGPTL1O95841 491 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 FGF4P08620 206 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 BCKDHAP12694 445 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 PEPDP12955 493 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 CHMP24386 653 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 CLK3P49761 638 aaKnown RBP8.68□□□□□ -1.02
MSH5-218ENST00000494646 ART1P52961 327 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 SUCLG1P53597 346 aaKnown RBP8.68□□□□□ -1.02
MSH5-218ENST00000494646 IST1P53990 364 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 CLDN15P56746 228 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 B3GALT5-AS1P59052 145 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 PSPHP78330 225 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 GRAMD1BQ3KR37 738 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 UGT3A2Q3SY77 523 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 FLYWCH1Q4VC44 716 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 RAET1LQ5VY80 246 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 FBXW10Q5XX13 1052 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 KANK2Q63ZY3 851 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 FIGNL1Q6PIW4 674 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 IKBIPQ70UQ0 350 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 CHMP1BQ7LBR1 199 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 GRAMD2AQ8IUY3 354 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 FADS6Q8N9I5 356 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 CEP70Q8NHQ1 597 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 GOT1L1Q8NHS2 421 aaPredicted RBP8.68□□□□□ -1.02
MSH5-218ENST00000494646 TWIST2Q8WVJ9 160 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.68□□□□□ -1.02
MSH5-218ENST00000494646 SMPDL3BQ92485 455 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 WNT2BQ93097 391 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 PPCDCQ96CD2 204 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 RMND5BQ96G75 393 aaPredicted RBP8.68□□□□□ -1.02
MSH5-218ENST00000494646 C3orf30Q96M34 536 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 TM9SF2Q99805 663 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 TRMOQ9BU70 441 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 RBM24Q9BX46 236 aaKnown RBP8.68□□□□□ -1.02
MSH5-218ENST00000494646 CLEC4MQ9H2X3 399 aaPredicted RBP8.68□□□□□ -1.02
MSH5-218ENST00000494646 C3orf14Q9HBI5 128 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 EML4Q9HC35 981 aaKnown RBP8.68□□□□□ -1.02
MSH5-218ENST00000494646 RASSF1Q9NS23 344 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 CCM2LQ9NUG4 571 aaPredicted RBP8.68□□□□□ -1.02
MSH5-218ENST00000494646 FBXO34Q9NWN3 711 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 ZDHHC2Q9UIJ5 367 aa8.68□□□□□ -1.02
MSH5-218ENST00000494646 MRTO4Q9UKD2 239 aaKnown RBP8.68□□□□□ -1.02
MSH5-218ENST00000494646 SETD2Q9BYW2 2564 aaPredicted RBP8.67□□□□□ -1.02
MSH5-218ENST00000494646 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 OR2M5A3KFT3 312 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 WDR91A4D1P6 747 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 TUBAL3A6NHL2 446 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 A6NNC1 897 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 NPIPB8E9PQR5 432 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 H3BML4 177 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 SEC14L5O43304 696 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 EMC8O43402 210 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 SLITRK5O94991 958 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 NKX2-2O95096 273 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 IL18BPO95998 194 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 OPN1LWP04000 364 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 NUDT17P0C025 328 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 ACP2P11117 423 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 EPXP11678 715 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 ZNF708P17019 499 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 CPA2P48052 419 aa8.67□□□□□ -1.02
MSH5-218ENST00000494646 PSMD4P55036 377 aaKnown RBP8.67□□□□□ -1.02
MSH5-218ENST00000494646 C17orf67Q0P5P2 114 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms