RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 SCN3BQ9NY72 215 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 PTTG2Q9NZH5 202 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 SUSD2Q9UGT4 822 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 PCDHGA10Q9Y5H3 936 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 SOX14O95416 240 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 NTN1O95631 604 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 DBIP07108 87 aaKnown RBP15.35■□□□□ 0.05
ATG4B-225ENST00000494465 NID1P14543 1247 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 PLAURQ03405 335 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 ZNF267Q14586 743 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-225ENST00000494465 C11orf74Q86VG3 221 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 KMT5CQ86Y97 462 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 LINC00471Q8N535 108 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 OR4C6Q8NH72 309 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 PIGKQ92643 395 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 MVB12AQ96EY5 273 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 PLCXD1Q9NUJ7 323 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 DHCR7Q9UBM7 475 aaKnown RBP15.35■□□□□ 0.05
ATG4B-225ENST00000494465 ZDBF2Q9HCK1 2354 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 FAM20BO75063 409 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 CLPSP04118 112 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 CCNYL3P0C7X3 344 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 DCKP27707 260 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 CNR2P34972 360 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 TEKQ02763 1124 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 EMX1Q04741 257 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-225ENST00000494465 FUT7Q11130 342 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 MRPL2Q5T653 305 aaKnown RBP15.34■□□□□ 0.05
ATG4B-225ENST00000494465 PEAR1Q5VY43 1037 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-225ENST00000494465 GUSBP11Q6P575 273 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 ZNF574Q6ZN55 896 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-225ENST00000494465 C1orf210Q8IVY1 113 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 DEPDC4Q8N2C3 294 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 ZNF540Q8NDQ6 660 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 OR4N2Q8NGD1 307 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 MUL1Q969V5 352 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 CNDP2Q96KP4 475 aaKnown RBP15.34■□□□□ 0.05
ATG4B-225ENST00000494465 NECAB3Q96P71 396 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-225ENST00000494465 MCHR1Q99705 422 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 DUSP23Q9BVJ7 150 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 POLR2J3Q9H1A7 115 aaKnown RBP15.34■□□□□ 0.05
ATG4B-225ENST00000494465 ZNF768Q9H5H4 540 aaKnown RBP15.34■□□□□ 0.05
ATG4B-225ENST00000494465 CAPN10Q9HC96 672 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 VCX3AQ9NNX9 186 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 POLE3Q9NRF9 147 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 NDOR1Q9UHB4 597 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 ZNF701M0R085 212 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-225ENST00000494465 BCAS1O75363 584 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-225ENST00000494465 IGKV1D-16P01601 117 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 PNLIPP16233 465 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 ITIH1P19827 911 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 ALAS2P22557 587 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 POU1F1P28069 291 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 PEX19P40855 299 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 TRAM2Q15035 370 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 EIPR1Q53HC9 387 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 PERM1Q5SV97 790 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 NPSR1Q6W5P4 371 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 ALDH16A1Q8IZ83 802 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 FAR1Q8WVX9 515 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 EDAQ92838 391 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 PMM1Q92871 262 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 ZNF501Q96CX3 271 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-225ENST00000494465 DOK1Q99704 481 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 ANKRD19PQ9H560 264 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 ERVK-19Q9WJR5 959 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 SNX5Q9Y5X3 404 aa15.34■□□□□ 0.05
ATG4B-225ENST00000494465 CDHR4A6H8M9 788 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 AP3D1O14617 1153 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 SIGLEC6O43699 453 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 SOX30O94993 753 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 PRG2P13727 222 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 GALNSP34059 522 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 MASP1P48740 699 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 EFNA3P52797 238 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 CSNK2BP67870 215 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 ST3GAL3Q11203 375 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 GPR107Q5VW38 600 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 GDF7Q7Z4P5 450 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 ZNF615Q8N8J6 731 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 SLC38A4Q969I6 547 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 CCDC90BQ9GZT6 254 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 NAA50Q9GZZ1 169 aaKnown RBP15.33■□□□□ 0.04
ATG4B-225ENST00000494465 CACYBPQ9HB71 228 aaKnown RBP15.33■□□□□ 0.04
ATG4B-225ENST00000494465 FKBP14Q9NWM8 211 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 ATXN7L1Q9ULK2 861 aaPredicted RBP15.33■□□□□ 0.04
ATG4B-225ENST00000494465 FRYLO94915 3013 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 GUSBP08236 651 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 ATXN8OSP0DMR3 200 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 CT45A8P0DMV1 189 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 CT45A9P0DMV2 189 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 RNF144AP50876 292 aaPredicted RBP15.33■□□□□ 0.04
ATG4B-225ENST00000494465 ALDH6A1Q02252 535 aaKnown RBP15.33■□□□□ 0.04
ATG4B-225ENST00000494465 COX10Q12887 443 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 LSAMPQ13449 338 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 SQSTM1Q13501 440 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 SERTAD2Q14140 314 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 NR0B2Q15466 257 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 CT45A2Q5DJT8 189 aa15.33■□□□□ 0.04
ATG4B-225ENST00000494465 SLX4IPQ5VYV7 408 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms