RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 NOP53Q9NZM5 478 aaKnown RBP12.07□□□□□ -0.48
ERCC3-209ENST00000494464 SPRR3Q9UBC9 169 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 GIMAP2Q9UG22 337 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 GPR55Q9Y2T6 319 aaPredicted RBP12.07□□□□□ -0.48
ERCC3-209ENST00000494464 NDUFAF1Q9Y375 327 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 PCDHGB3Q9Y5G1 929 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 OR6C70A6NIJ9 312 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 MRASO14807 208 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 ABCB7O75027 752 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 WDR1O75083 606 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 COQ9O75208 318 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 CT45A8P0DMV1 189 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 CT45A9P0DMV2 189 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 ELAVL4P26378 380 aaKnown RBP12.06□□□□□ -0.48
ERCC3-209ENST00000494464 ACVR2AP27037 513 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 GDF1P27539 372 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 NTSP30990 170 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 PTGER4P35408 488 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 MASP1P48740 699 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 SNTA1Q13424 505 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 MMEL1Q495T6 779 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 CT45A2Q5DJT8 189 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 OR7G2Q8NG99 324 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 NEIL3Q8TAT5 605 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 ASB5Q8WWX0 329 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 KAT2AQ92830 837 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 STMN2Q93045 179 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 SDCCAG3Q96C92 435 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 SLC35A4Q96G79 324 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 JSRP1Q96MG2 331 aaPredicted RBP12.06□□□□□ -0.48
ERCC3-209ENST00000494464 OSBPL11Q9BXB4 747 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 RUBCNLQ9H714 662 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 FOLH1BQ9HBA9 442 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 TAS2R9Q9NYW1 312 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 EXO1Q9UQ84 846 aaKnown RBP12.06□□□□□ -0.48
ERCC3-209ENST00000494464 C15orf41Q9Y2V0 281 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 TMED5Q9Y3A6 229 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 NINQ8N4C6 2090 aa12.06□□□□□ -0.48
ERCC3-209ENST00000494464 FAM234BA2RU67 622 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 PLOD2O00469 737 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 NR5A2O00482 541 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 TBX19O60806 448 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 UGT2B11O75310 529 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 FKBP6O75344 327 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 SEC22BO75396 215 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 ERN1O75460 977 aaKnown RBP12.05□□□□□ -0.48
ERCC3-209ENST00000494464 PDE5AO76074 875 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 PSMG1O95456 288 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 HPNP05981 417 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 CAPN3P20807 821 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 TACR1P25103 407 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 CHRNB4P30926 498 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 CDK9P50750 372 aaKnown RBP12.05□□□□□ -0.48
ERCC3-209ENST00000494464 NCBP2P52298 156 aaKnown RBP eCLIP12.05□□□□□ -0.48
ERCC3-209ENST00000494464 DIO3P55073 304 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 PRSS53Q2L4Q9 553 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 WLSQ5T9L3 541 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 SLC30A6Q6NXT4 461 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 AAGABQ6PD74 315 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 BLOC1S3Q6QNY0 202 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 NPSR1Q6W5P4 371 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 LIX1Q8N485 282 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 RPRMLQ8N4K4 120 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 OR5M9Q8NGP3 310 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 CA5BP1Q8WTZ4 195 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 RND1Q92730 232 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 NODALQ96S42 347 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 SLC6A15Q9H2J7 730 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 EXO5Q9H790 373 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 METTL7AQ9H8H3 244 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 ANKRA2Q9H9E1 313 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 SLC52A3Q9NQ40 469 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 ACAD8Q9UKU7 415 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 POMPQ9Y244 141 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 FAM215AQ9Y5M1 114 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 ADGRG4Q8IZF6 3080 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 A0A1W2PP18 115 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 PRAMEF25A6NGN4 478 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 SNPHO15079 494 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 ANGPT2O15123 496 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 TSPAN2O60636 221 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 SLC22A3O75751 556 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 HOXD4P09016 255 aaPredicted RBP12.05□□□□□ -0.48
ERCC3-209ENST00000494464 GABRA1P14867 456 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 SDC1P18827 310 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 PTPN6P29350 595 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 PTGDSP41222 190 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 MC3RP41968 323 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 ZFP36L2P47974 494 aaKnown RBP12.05□□□□□ -0.48
ERCC3-209ENST00000494464 NUP107P57740 925 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 PSME3P61289 254 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 RPL38P63173 70 aaKnown RBP12.05□□□□□ -0.48
ERCC3-209ENST00000494464 SPATS1Q496A3 300 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 TIGD3Q6B0B8 471 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 RTL6Q6ICC9 239 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 B3GNT6Q6ZMB0 384 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 OR2L13Q8N349 312 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 ACBD4Q8NC06 268 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 RNF138Q8WVD3 245 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 TMBIM1Q969X1 311 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms