RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 UBE2UQ5VVX9 321 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 PMS2CLQ68D20 193 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 C1orf94Q6P1W5 598 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 FIGNL1Q6PIW4 674 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 ZER1Q7Z7L7 766 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 WDR5BQ86VZ2 330 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 KIF18BQ86Y91 864 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 SLC25A45Q8N413 288 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 IQCF1Q8N6M8 205 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 POGLUT1Q8NBL1 392 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 RAB2BQ8WUD1 216 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 RORBQ92753 470 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 SLC38A4Q969I6 547 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 YIPF6Q96EC8 236 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 MMABQ96EY8 250 aaPredicted RBP9.9□□□□□ -0.82
CLCN6-208ENST00000494028 VSTM2LQ96N03 204 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 DGAT2Q96PD7 388 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 MCHR1Q99705 422 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 DCUN1D5Q9BTE7 237 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 FUNDC2Q9BWH2 189 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 SPRTNQ9H040 489 aaPredicted RBP9.9□□□□□ -0.82
CLCN6-208ENST00000494028 POLR2J3Q9H1A7 115 aaKnown RBP9.9□□□□□ -0.82
CLCN6-208ENST00000494028 IRAK4Q9NWZ3 460 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 SELENONQ9NZV5 590 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 SEMA5BQ9P283 1151 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 DTX4Q9Y2E6 619 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 HEMK1Q9Y5R4 338 aaPredicted RBP9.9□□□□□ -0.82
CLCN6-208ENST00000494028 BDP1A6H8Y1 2624 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 ARID1BQ8NFD5 2236 aaPredicted RBP9.89□□□□□ -0.83
CLCN6-208ENST00000494028 EXPH5Q8NEV8 1989 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 CCDC163A0A0D9SF12 145 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 HRKO00198 91 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 KLF4O43474 513 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 MPZL2O60487 215 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 PRAMEF2O60811 474 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 CTNSO60931 367 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 CYP7B1O75881 506 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 LYPD3O95274 346 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 PDGFBP01127 241 aaPredicted RBP9.89□□□□□ -0.83
CLCN6-208ENST00000494028 IGKV1D-16P01601 117 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 CLPSP04118 112 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 GUSBP08236 651 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 ADRA2AP08913 450 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 CCNYL3P0C7X3 344 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 ADORA3P0DMS8 318 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 MYF5P13349 255 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 MAOAP21397 527 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 PSMB9P28065 219 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 POU1F1P28069 291 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 ALDH4A1P30038 563 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 GABRA3P34903 492 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 GPR3P46089 330 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 OMPP47874 163 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 EMDP50402 254 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 SNRPGP62308 76 aaKnown RBP9.89□□□□□ -0.83
CLCN6-208ENST00000494028 BTG2P78543 158 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 GPLD1P80108 840 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 PSG6Q00889 435 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 ST3GAL3Q11203 375 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 NFATC3Q12968 1075 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 ERV3-1Q14264 604 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 IRF3Q14653 427 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 GDF7Q7Z4P5 450 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 LSRQ86X29 649 aaPredicted RBP9.89□□□□□ -0.83
CLCN6-208ENST00000494028 MEX3DQ86XN8 651 aaKnown RBP9.89□□□□□ -0.83
CLCN6-208ENST00000494028 ANKRD13BQ86YJ7 626 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 NKAIN4Q8IVV8 208 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 OR8D4Q8NGM9 314 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 PIGXQ8TBF5 258 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 GPR151Q8TDV0 419 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 ACOT11Q8WXI4 607 aaPredicted RBP9.89□□□□□ -0.83
CLCN6-208ENST00000494028 FCGR1BQ92637 280 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 GGHQ92820 318 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 FGF11Q92914 225 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 CCDC74AQ96AQ1 378 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 SLC41A3Q96GZ6 507 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 SLC41A2Q96JW4 573 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 ELF4Q99607 663 aaPredicted RBP9.89□□□□□ -0.83
CLCN6-208ENST00000494028 PELOQ9BRX2 385 aaKnown RBP9.89□□□□□ -0.83
CLCN6-208ENST00000494028 PLA2G12AQ9BZM1 189 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 POLR2J2Q9GZM3 115 aaKnown RBP9.89□□□□□ -0.83
CLCN6-208ENST00000494028 DSN1Q9H410 356 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 MTHFD2LQ9H903 347 aaPredicted RBP9.89□□□□□ -0.83
CLCN6-208ENST00000494028 NECTIN3Q9NQS3 549 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 LANCL2Q9NS86 450 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 CUTCQ9NTM9 273 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 GPR83Q9NYM4 423 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 DNAJC27Q9NZQ0 273 aa9.89□□□□□ -0.83
CLCN6-208ENST00000494028 TESQ9UGI8 421 aaKnown RBP9.89□□□□□ -0.83
CLCN6-208ENST00000494028 WARS2Q9UGM6 360 aaKnown RBP9.89□□□□□ -0.83
CLCN6-208ENST00000494028 ASXL3Q9C0F0 2248 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 SH3D21A4FU49 640 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 CDHR4A6H8M9 788 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 CLCA1A8K7I4 914 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 TMEM150CB9EJG8 249 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 H3BN98 237 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 KCNK2O95069 426 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 PIPP12273 146 aaPredicted RBP9.88□□□□□ -0.83
CLCN6-208ENST00000494028 PRG2P13727 222 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 GLB1P16278 677 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms